Analysis of interatomic Contacts of Structural Units in PDB entry:
6PRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PRO entry

There are 2 chains in PDB entry 6PRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ALA 202
B
 PRO 1ALA 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6PRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 29Right-handed alpha
Helix 2
AA2
A
29 43Right-handed alpha
Helix 3
AA3
A
52 59Right-handed alpha
Helix 4
AA4
A
60 63Right-handed 310
Helix 5
AA5
A
64 87Right-handed alpha
Helix 6
AA6
A
97 109Right-handed alpha
Helix 7
AA7
A
110 125Right-handed alpha
Helix 8
AA8
A
150 155Right-handed 310
Helix 9
AA9
A
165 168Right-handed 310
Helix 10
AB1
A
169 174Right-handed alpha
Helix 11
AB2
A
176 185Right-handed alpha
Helix 12
AB3
A
186 188Right-handed 310
Helix 13
AB4
A
189 202Right-handed alpha
Helix 14
AB5
B
19 29Right-handed alpha
Helix 15
AB6
B
29 43Right-handed alpha
Helix 16
AB7
B
45 49Right-handed 310
Helix 17
AB8
B
52 59Right-handed alpha
Helix 18
AB9
B
60 63Right-handed 310
Helix 19
AC1
B
67 87Right-handed alpha
Helix 20
AC2
B
97 109Right-handed alpha
Helix 21
AC3
B
110 125Right-handed alpha
Helix 22
AC4
B
150 155Right-handed 310
Helix 23
AC5
B
165 168Right-handed 310
Helix 24
AC6
B
169 174Right-handed alpha
Helix 25
AC7
B
176 185Right-handed alpha
Helix 26
AC8
B
186 188Right-handed 310
Helix 27
AC9
B
189 201Right-handed alpha
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There are 2 sheets in PDB entry 6PRO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 146first strand
Strand 2
A
129 136anti-parallel
Strand 3
A
157 163anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 146first strand
Strand 2
B
129 136anti-parallel
Strand 3
B
157 163anti-parallel
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