Analysis of interatomic Contacts of Structural Units in PDB entry:
6PS2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PS2 entry

There is 1 chain in PDB entry 6PS2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28LEU 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6PS2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 61Right-handed alpha
Helix 2
AA2
A
62 65Right-handed 310
Helix 3
AA3
A
66 86Right-handed alpha
Helix 4
AA4
A
86 96Right-handed alpha
Helix 5
AA5
A
101 136Right-handed alpha
Helix 6
AA6
A
146 171Right-handed alpha
Helix 7
AA7
A
178 187Right-handed alpha
Helix 8
AA8
A
196 208Right-handed alpha
Helix 9
AA9
A
208 229Right-handed alpha
Helix 10
AB1
A
1002 1012Right-handed alpha
Helix 11
AB2
A
1038 1051Right-handed alpha
Helix 12
AB3
A
1059 1081Right-handed alpha
Helix 13
AB4
A
1084 1091Right-handed alpha
Helix 14
AB5
A
1092 1107Right-handed alpha
Helix 15
AB6
A
1107 1112Right-handed alpha
Helix 16
AB7
A
1114 1123Right-handed alpha
Helix 17
AB8
A
1125 1135Right-handed alpha
Helix 18
AB9
A
1136 1142Right-handed alpha
Helix 19
AC1
A
1142 1156Right-handed alpha
Helix 20
AC2
A
266 299Right-handed alpha
Helix 21
AC3
A
305 318Right-handed alpha
Helix 22
AC4
A
321 326Right-handed alpha
Helix 23
AC5
A
329 340Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6PS2.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1014 1019first strand
Strand 2
A
1025 1028anti-parallel
Strand 3
A
1031 1034anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il