Analysis of interatomic Contacts of Structural Units in PDB entry:
6PSO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PSO entry

There are 2 chains in PDB entry 6PSO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 27PRO 473
A
 SER 27PRO 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6PSO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
44 48Right-handed 310
Helix 2
AA2
B
54 64Right-handed alpha
Helix 3
AA3
B
76 87Right-handed alpha
Helix 4
AA4
B
89 94Right-handed 310
Helix 5
AA5
B
111 115Right-handed 310
Helix 6
AA6
B
123 131Right-handed alpha
Helix 7
AA7
B
146 154Right-handed 310
Helix 8
AA8
B
173 179Right-handed alpha
Helix 9
AA9
B
183 188Right-handed 310
Helix 10
AB1
B
202 218Right-handed alpha
Helix 11
AB2
B
239 244Right-handed alpha
Helix 12
AB3
B
250 277Right-handed alpha
Helix 13
AB4
B
279 281Right-handed 310
Helix 14
AB5
B
294 299Right-handed alpha
Helix 15
AB6
B
313 318Right-handed alpha
Helix 16
AB7
B
343 352Right-handed alpha
Helix 17
AB8
B
366 371Right-handed alpha
Helix 18
AB9
B
426 442Right-handed alpha
Helix 19
AC1
B
453 466Right-handed alpha
Helix 20
AC2
A
44 48Right-handed 310
Helix 21
AC3
A
54 63Right-handed alpha
Helix 22
AC4
A
76 87Right-handed alpha
Helix 23
AC5
A
89 94Right-handed 310
Helix 24
AC6
A
111 115Right-handed 310
Helix 25
AC7
A
123 131Right-handed alpha
Helix 26
AC8
A
146 154Right-handed 310
Helix 27
AC9
A
173 180Right-handed alpha
Helix 28
AD1
A
183 188Right-handed 310
Helix 29
AD2
A
202 218Right-handed alpha
Helix 30
AD3
A
239 244Right-handed alpha
Helix 31
AD4
A
250 277Right-handed alpha
Helix 32
AD5
A
279 281Right-handed 310
Helix 33
AD6
A
294 299Right-handed alpha
Helix 34
AD7
A
313 318Right-handed alpha
Helix 35
AD8
A
343 352Right-handed alpha
Helix 36
AD9
A
366 371Right-handed alpha
Helix 37
AE1
A
426 442Right-handed alpha
Helix 38
AE2
A
454 466Right-handed alpha
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There are 6 sheets in PDB entry 6PSO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 196first strand
Strand 2
B
190 191anti-parallel
Strand 3
B
158 162anti-parallel
Strand 4
B
134 140parallel
Strand 5
B
223 228parallel
Strand 6
B
30 36parallel
Strand 7
B
283 289parallel
Strand 8
B
322 324anti-parallel
Strand 9
B
65 67anti-parallel
Strand 10
B
333 335parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 71first strand
Strand 2
B
339 340parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 386first strand
Strand 2
B
389 394anti-parallel
Strand 3
B
397 401anti-parallel
Strand 4
B
408 411anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 196first strand
Strand 2
A
190 191anti-parallel
Strand 3
A
158 162anti-parallel
Strand 4
A
134 140parallel
Strand 5
A
223 228parallel
Strand 6
A
30 36parallel
Strand 7
A
283 289parallel
Strand 8
A
322 324anti-parallel
Strand 9
A
65 67anti-parallel
Strand 10
A
333 335parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
339 340parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 386first strand
Strand 2
A
389 394anti-parallel
Strand 3
A
397 401anti-parallel
Strand 4
A
408 411anti-parallel
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