Analysis of interatomic Contacts of Structural Units in PDB entry:
6PSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PSX entry

There are 2 chains in PDB entry 6PSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 196MET 1241
E
 LYS 21ARG 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6PSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
212 222Right-handed alpha
Helix 2
AA2
A
227 237Right-handed alpha
Helix 3
AA3
A
249 281Right-handed alpha
Helix 4
AA4
A
351 355Right-handed 310
Helix 5
AA5
A
361 365Right-handed 310
Helix 6
AA6
A
441 473Right-handed alpha
Helix 7
AA7
A
486 502Right-handed alpha
Helix 8
AA8
A
510 527Right-handed alpha
Helix 9
AA9
A
528 532Right-handed 310
Helix 10
AB1
A
544 552Right-handed 310
Helix 11
AB2
A
599 613Right-handed alpha
Helix 12
AB3
A
619 633Right-handed alpha
Helix 13
AB4
A
652 664Right-handed alpha
Helix 14
AB5
A
723 728Right-handed alpha
Helix 15
AB6
A
732 737Right-handed alpha
Helix 16
AB7
A
739 750Right-handed alpha
Helix 17
AB8
A
765 779Right-handed alpha
Helix 18
AB9
A
788 794Right-handed alpha
Helix 19
AC1
A
816 827Right-handed alpha
Helix 20
AC2
A
838 849Right-handed alpha
Helix 21
AC3
A
867 881Right-handed alpha
Helix 22
AC4
A
899 904Right-handed alpha
Helix 23
AC5
A
911 919Right-handed alpha
Helix 24
AC6
A
931 944Right-handed alpha
Helix 25
AC7
A
958 963Right-handed alpha
Helix 26
AC8
A
977 982Right-handed alpha
Helix 27
AC9
A
991 1029Right-handed alpha
Helix 28
AD1
A
1042 1053Right-handed alpha
Helix 29
AD2
A
1055 1063Right-handed alpha
Helix 30
AD3
A
1069 1073Right-handed 310
Helix 31
AD4
A
1077 1086Right-handed alpha
Helix 32
AD5
A
1091 1116Right-handed alpha
Helix 33
AD6
A
1130 1153Right-handed alpha
Helix 34
AD7
A
1164 1183Right-handed alpha
Helix 35
AD8
A
1194 1200Right-handed alpha
Helix 36
AD9
A
1205 1215Right-handed alpha
Helix 37
AE1
A
1216 1227Right-handed alpha
Helix 38
AE2
A
1233 1239Right-handed alpha
Helix 39
AE3
E
41 69Right-handed alpha
Helix 40
AE4
E
78 81Right-handed 310
Helix 41
AE5
E
150 155Right-handed alpha
Helix 42
AE6
E
158 163Right-handed alpha
Helix 43
AE7
E
173 179Right-handed 310
Helix 44
AE8
E
190 195Right-handed alpha
Helix 45
AE9
E
226 231Right-handed alpha
Helix 46
AF1
E
245 249Right-handed 310
Helix 47
AF2
E
262 267Right-handed alpha
Helix 48
AF3
E
268 273Right-handed alpha
Helix 49
AF4
E
330 343Right-handed alpha
Helix 50
AF5
E
345 356Right-handed alpha
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There are 11 sheets in PDB entry 6PSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 297first strand
Strand 2
A
284 286anti-parallel
Strand 3
A
307 310anti-parallel
Strand 4
A
413 417anti-parallel
Strand 5
A
320 321anti-parallel
Strand 6
A
400 401anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
406 407anti-parallel
Strand 3
A
332 335anti-parallel
Strand 4
A
346 348anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 387first strand
Strand 2
A
392 395anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
554 557first strand
Strand 2
A
948 953parallel
Strand 3
A
968 971parallel
Strand 4
A
985 987parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 576first strand
Strand 2
A
802 811anti-parallel
Strand 3
A
755 763anti-parallel
Strand 4
A
716 722anti-parallel
Strand 5
A
704 710anti-parallel
Strand 6
A
689 696anti-parallel
Strand 7
A
677 679anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 640first strand
Strand 2
A
646 649anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
833 834first strand
Strand 2
A
923 927parallel
Strand 3
A
894 898parallel
Strand 4
A
859 861parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
74 76first strand
Strand 2
E
315 320anti-parallel
Strand 3
E
137 143anti-parallel
Strand 4
E
281 288anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
90 91first strand
Strand 2
E
110 113anti-parallel
Strand 3
E
122 128anti-parallel
Strand 4
E
297 303anti-parallel
Strand 5
E
201 202anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
90 91first strand
Strand 2
E
110 113anti-parallel
Strand 3
E
122 128anti-parallel
Strand 4
E
297 303anti-parallel
Strand 5
E
205 209anti-parallel
Strand 6
E
215 216anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
181 182first strand
Strand 2
E
185 187anti-parallel
Strand 3
E
241 242parallel
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