Analysis of interatomic Contacts of Structural Units in PDB entry:
6PT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PT2 entry

There are 4 chains in PDB entry 6PT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 999PHE 329
B
 ASP 1002CYS 333
C
 PHE 3PHE 3
D
 PHE 3PHE 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6PT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
999 1019Right-handed alpha
Helix 2
AA2
A
1022 1041Right-handed alpha
Helix 3
AA3
A
1055 1082Right-handed alpha
Helix 4
AA4
A
1085 1090Right-handed alpha
Helix 5
AA5
A
1091 1101Right-handed alpha
Helix 6
AA6
A
1102 1106Right-handed 310
Helix 7
AA7
A
45 77Right-handed alpha
Helix 8
AA8
A
82 100Right-handed alpha
Helix 9
AA9
A
101 112Right-handed alpha
Helix 10
AB1
A
117 152Right-handed alpha
Helix 11
AB2
A
155 160Right-handed alpha
Helix 12
AB3
A
161 176Right-handed alpha
Helix 13
AB4
A
176 186Right-handed alpha
Helix 14
AB5
A
205 222Right-handed alpha
Helix 15
AB6
A
222 247Right-handed alpha
Helix 16
AB7
A
253 287Right-handed alpha
Helix 17
AB8
A
293 322Right-handed alpha
Helix 18
AB9
A
322 329Right-handed alpha
Helix 19
AC1
B
1003 1018Right-handed alpha
Helix 20
AC2
B
1024 1042Right-handed alpha
Helix 21
AC3
B
1059 1078Right-handed alpha
Helix 22
AC4
B
1092 1098Right-handed alpha
Helix 23
AC5
B
1099 1101Right-handed 310
Helix 24
AC6
B
42 77Right-handed alpha
Helix 25
AC7
B
82 100Right-handed alpha
Helix 26
AC8
B
101 112Right-handed alpha
Helix 27
AC9
B
116 152Right-handed alpha
Helix 28
AD1
B
152 160Right-handed alpha
Helix 29
AD2
B
161 176Right-handed alpha
Helix 30
AD3
B
176 186Right-handed alpha
Helix 31
AD4
B
205 221Right-handed alpha
Helix 32
AD5
B
222 242Right-handed alpha
Helix 33
AD6
B
251 287Right-handed alpha
Helix 34
AD7
B
293 313Right-handed alpha
Helix 35
AD8
B
314 325Right-handed alpha
Helix 36
AD9
B
325 329Right-handed alpha
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There are 3 sheets in PDB entry 6PT2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
B
330 332anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 192first strand
Strand 2
A
195 200anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
195 200anti-parallel
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