Analysis of interatomic Contacts of Structural Units in PDB entry:
6PUN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PUN entry

There are 6 chains in PDB entry 6PUN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 167THR 568
B
 C 1 U 8
C
 VAL 167ASN 564
D
 U 2 U 8
E
 LEU 76LYS 90
F
 GLY 75LYS 90
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6PUN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 173Right-handed 310
Helix 2
AA2
A
184 192Right-handed alpha
Helix 3
AA3
A
193 199Right-handed alpha
Helix 4
AA4
A
200 211Right-handed alpha
Helix 5
AA5
A
216 229Right-handed alpha
Helix 6
AA6
A
230 239Right-handed alpha
Helix 7
AA7
A
242 257Right-handed alpha
Helix 8
AA8
A
261 276Right-handed alpha
Helix 9
AA9
A
276 282Right-handed alpha
Helix 10
AB1
A
285 297Right-handed alpha
Helix 11
AB2
A
298 308Right-handed alpha
Helix 12
AB3
A
313 321Right-handed alpha
Helix 13
AB4
A
324 335Right-handed alpha
Helix 14
AB5
A
336 349Right-handed alpha
Helix 15
AB6
A
349 358Right-handed alpha
Helix 16
AB7
A
361 375Right-handed alpha
Helix 17
AB8
A
383 404Right-handed alpha
Helix 18
AB9
A
404 410Right-handed alpha
Helix 19
AC1
A
414 424Right-handed alpha
Helix 20
AC2
A
427 438Right-handed alpha
Helix 21
AC3
A
442 448Right-handed alpha
Helix 22
AC4
A
451 463Right-handed alpha
Helix 23
AC5
A
464 478Right-handed alpha
Helix 24
AC6
A
488 495Right-handed alpha
Helix 25
AC7
A
498 515Right-handed alpha
Helix 26
AC8
A
527 545Right-handed alpha
Helix 27
AC9
A
545 550Right-handed alpha
Helix 28
AD1
A
552 568Right-handed alpha
Helix 29
AD2
C
169 173Right-handed 310
Helix 30
AD3
C
184 192Right-handed alpha
Helix 31
AD4
C
193 199Right-handed alpha
Helix 32
AD5
C
200 211Right-handed alpha
Helix 33
AD6
C
216 229Right-handed alpha
Helix 34
AD7
C
230 239Right-handed alpha
Helix 35
AD8
C
242 257Right-handed alpha
Helix 36
AD9
C
261 276Right-handed alpha
Helix 37
AE1
C
276 283Right-handed alpha
Helix 38
AE2
C
285 297Right-handed alpha
Helix 39
AE3
C
298 308Right-handed alpha
Helix 40
AE4
C
314 321Right-handed alpha
Helix 41
AE5
C
323 335Right-handed alpha
Helix 42
AE6
C
336 349Right-handed alpha
Helix 43
AE7
C
349 358Right-handed alpha
Helix 44
AE8
C
361 375Right-handed alpha
Helix 45
AE9
C
383 404Right-handed alpha
Helix 46
AF1
C
404 410Right-handed alpha
Helix 47
AF2
C
414 424Right-handed alpha
Helix 48
AF3
C
427 439Right-handed alpha
Helix 49
AF4
C
442 448Right-handed alpha
Helix 50
AF5
C
451 463Right-handed alpha
Helix 51
AF6
C
464 478Right-handed alpha
Helix 52
AF7
C
488 495Right-handed alpha
Helix 53
AF8
C
498 515Right-handed alpha
Helix 54
AF9
C
529 545Right-handed alpha
Helix 55
AG1
C
545 550Right-handed alpha
Helix 56
AG2
C
552 563Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6PUN.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
521 522first strand
Strand 2
A
525 526anti-parallel
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