Analysis of interatomic Contacts of Structural Units in PDB entry:
6PVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PVQ entry

There are 4 chains in PDB entry 6PVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 84ARG 758
B
 LYS 115HIS 745
C
 ASP 84ARG 758
D
 LYS 115HIS 745
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are103 helices in PDB entry 6PVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
116 130Right-handed alpha
Helix 2
AA2
A
131 146Right-handed alpha
Helix 3
AA3
A
153 163Right-handed alpha
Helix 4
AA4
A
170 178Right-handed alpha
Helix 5
AA5
A
182 197Right-handed alpha
Helix 6
AA6
A
199 205Right-handed alpha
Helix 7
AA7
A
210 214Right-handed 310
Helix 8
AA8
A
217 225Right-handed alpha
Helix 9
AA9
A
227 238Right-handed alpha
Helix 10
AB1
A
264 272Right-handed alpha
Helix 11
AB2
A
274 284Right-handed alpha
Helix 12
AB3
A
298 305Right-handed alpha
Helix 13
AB4
A
315 329Right-handed alpha
Helix 14
AB5
A
330 334Right-handed 310
Helix 15
AB6
A
343 352Right-handed alpha
Helix 16
AB7
A
353 363Right-handed alpha
Helix 17
AB8
A
367 374Right-handed 310
Helix 18
AB9
A
402 410Right-handed alpha
Helix 19
AC1
A
415 420Right-handed alpha
Helix 20
AC2
A
422 436Right-handed alpha
Helix 21
AC3
A
436 457Right-handed alpha
Helix 22
AC4
A
458 460Right-handed 310
Helix 23
AC5
A
482 505Right-handed alpha
Helix 24
AC6
A
521 536Right-handed alpha
Helix 25
AC7
A
537 541Right-handed 310
Helix 26
AC8
A
550 561Right-handed alpha
Helix 27
AC9
A
688 706Right-handed alpha
Helix 28
AD1
B
118 130Right-handed alpha
Helix 29
AD2
B
131 147Right-handed alpha
Helix 30
AD3
B
154 163Right-handed alpha
Helix 31
AD4
B
170 178Right-handed alpha
Helix 32
AD5
B
182 197Right-handed alpha
Helix 33
AD6
B
199 205Right-handed alpha
Helix 34
AD7
B
217 225Right-handed alpha
Helix 35
AD8
B
227 238Right-handed alpha
Helix 36
AD9
B
264 272Right-handed alpha
Helix 37
AE1
B
274 284Right-handed alpha
Helix 38
AE2
B
298 305Right-handed alpha
Helix 39
AE3
B
316 328Right-handed alpha
Helix 40
AE4
B
330 336Right-handed alpha
Helix 41
AE5
B
343 352Right-handed alpha
Helix 42
AE6
B
353 362Right-handed alpha
Helix 43
AE7
B
367 371Right-handed 310
Helix 44
AE8
B
402 409Right-handed alpha
Helix 45
AE9
B
422 436Right-handed alpha
Helix 46
AF1
B
436 461Right-handed alpha
Helix 47
AF2
B
474 479Right-handed alpha
Helix 48
AF3
B
483 501Right-handed alpha
Helix 49
AF4
B
520 542Right-handed alpha
Helix 50
AF5
B
546 561Right-handed alpha
Helix 51
AF6
B
688 706Right-handed alpha
Helix 52
AF7
C
116 130Right-handed alpha
Helix 53
AF8
C
131 146Right-handed alpha
Helix 54
AF9
C
153 163Right-handed alpha
Helix 55
AG1
C
170 178Right-handed alpha
Helix 56
AG2
C
182 197Right-handed alpha
Helix 57
AG3
C
199 205Right-handed alpha
Helix 58
AG4
C
210 214Right-handed 310
Helix 59
AG5
C
217 225Right-handed alpha
Helix 60
AG6
C
227 238Right-handed alpha
Helix 61
AG7
C
264 272Right-handed alpha
Helix 62
AG8
C
274 284Right-handed alpha
Helix 63
AG9
C
298 305Right-handed alpha
Helix 64
AH1
C
315 329Right-handed alpha
Helix 65
AH2
C
330 334Right-handed 310
Helix 66
AH3
C
343 352Right-handed alpha
Helix 67
AH4
C
353 363Right-handed alpha
Helix 68
AH5
C
367 374Right-handed 310
Helix 69
AH6
C
402 410Right-handed alpha
Helix 70
AH7
C
415 420Right-handed alpha
Helix 71
AH8
C
422 436Right-handed alpha
Helix 72
AH9
C
436 457Right-handed alpha
Helix 73
AI1
C
458 460Right-handed 310
Helix 74
AI2
C
482 505Right-handed alpha
Helix 75
AI3
C
521 536Right-handed alpha
Helix 76
AI4
C
537 541Right-handed 310
Helix 77
AI5
C
550 561Right-handed alpha
Helix 78
AI6
C
688 706Right-handed alpha
Helix 79
AI7
D
118 130Right-handed alpha
Helix 80
AI8
D
131 147Right-handed alpha
Helix 81
AI9
D
154 163Right-handed alpha
Helix 82
AJ1
D
170 178Right-handed alpha
Helix 83
AJ2
D
182 197Right-handed alpha
Helix 84
AJ3
D
199 205Right-handed alpha
Helix 85
AJ4
D
217 225Right-handed alpha
Helix 86
AJ5
D
227 238Right-handed alpha
Helix 87
AJ6
D
264 272Right-handed alpha
Helix 88
AJ7
D
274 284Right-handed alpha
Helix 89
AJ8
D
298 305Right-handed alpha
Helix 90
AJ9
D
316 328Right-handed alpha
Helix 91
AK1
D
330 336Right-handed alpha
Helix 92
AK2
D
343 352Right-handed alpha
Helix 93
AK3
D
353 362Right-handed alpha
Helix 94
AK4
D
367 371Right-handed 310
Helix 95
AK5
D
402 409Right-handed alpha
Helix 96
AK6
D
422 436Right-handed alpha
Helix 97
AK7
D
436 461Right-handed alpha
Helix 98
AK8
D
474 479Right-handed alpha
Helix 99
AK9
D
483 501Right-handed alpha
Helix 100
AL1
D
520 542Right-handed alpha
Helix 101
AL2
D
546 561Right-handed alpha
Helix 102
AL3
D
562 566Right-handed 310
Helix 103
AL4
D
688 706Right-handed alpha
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There are 4 sheets in PDB entry 6PVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
735 736anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 382first strand
Strand 2
B
385 386anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
387 388first strand
Strand 2
C
735 736anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
381 382first strand
Strand 2
D
385 386anti-parallel
Strand 3
D
735 736anti-parallel
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