Analysis of interatomic Contacts of Structural Units in PDB entry:
6PW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PW1 entry

There are 4 chains in PDB entry 6PW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 17THR 550
B
 LEU 30HIS 285
C
 THR 18THR 550
D
 LEU 30HIS 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 6PW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 56Right-handed alpha
Helix 2
AA2
A
64 70Right-handed 310
Helix 3
AA3
A
73 80Right-handed alpha
Helix 4
AA4
A
84 88Right-handed 310
Helix 5
AA5
A
91 110Right-handed alpha
Helix 6
AA6
A
110 116Right-handed alpha
Helix 7
AA7
A
118 129Right-handed alpha
Helix 8
AA8
A
135 157Right-handed alpha
Helix 9
AA9
A
161 165Right-handed 310
Helix 10
AB1
A
177 182Right-handed alpha
Helix 11
AB2
A
185 215Right-handed alpha
Helix 12
AB3
A
221 225Right-handed 310
Helix 13
AB4
A
226 259Right-handed alpha
Helix 14
AB5
A
265 269Right-handed 310
Helix 15
AB6
A
271 306Right-handed alpha
Helix 16
AB7
A
312 327Right-handed alpha
Helix 17
AB8
A
328 329Right-handed 310
Helix 18
AB9
A
330 335Right-handed 310
Helix 19
AC1
A
341 355Right-handed alpha
Helix 20
AC2
A
355 371Right-handed alpha
Helix 21
AC3
A
378 403Right-handed alpha
Helix 22
AC4
A
403 411Right-handed alpha
Helix 23
AC5
A
413 425Right-handed alpha
Helix 24
AC6
A
427 445Right-handed alpha
Helix 25
AC7
A
449 477Right-handed alpha
Helix 26
AC8
A
487 489Right-handed 310
Helix 27
AC9
A
490 522Right-handed alpha
Helix 28
AD1
A
537 542Right-handed 310
Helix 29
AD2
B
48 84Right-handed alpha
Helix 30
AD3
B
97 128Right-handed alpha
Helix 31
AD4
B
163 167Right-handed 310
Helix 32
AD5
B
173 183Right-handed alpha
Helix 33
AD6
B
186 190Right-handed 310
Helix 34
AD7
B
222 225Right-handed 310
Helix 35
AD8
B
259 263Right-handed 310
Helix 36
AD9
B
271 282Right-handed alpha
Helix 37
AE1
C
25 56Right-handed alpha
Helix 38
AE2
C
64 70Right-handed 310
Helix 39
AE3
C
73 80Right-handed alpha
Helix 40
AE4
C
84 88Right-handed 310
Helix 41
AE5
C
91 110Right-handed alpha
Helix 42
AE6
C
110 116Right-handed alpha
Helix 43
AE7
C
118 129Right-handed alpha
Helix 44
AE8
C
135 158Right-handed alpha
Helix 45
AE9
C
161 165Right-handed 310
Helix 46
AF1
C
177 182Right-handed alpha
Helix 47
AF2
C
185 215Right-handed alpha
Helix 48
AF3
C
221 225Right-handed 310
Helix 49
AF4
C
226 259Right-handed alpha
Helix 50
AF5
C
265 269Right-handed 310
Helix 51
AF6
C
271 306Right-handed alpha
Helix 52
AF7
C
312 327Right-handed alpha
Helix 53
AF8
C
328 329Right-handed 310
Helix 54
AF9
C
330 335Right-handed 310
Helix 55
AG1
C
341 355Right-handed alpha
Helix 56
AG2
C
355 371Right-handed alpha
Helix 57
AG3
C
378 403Right-handed alpha
Helix 58
AG4
C
403 411Right-handed alpha
Helix 59
AG5
C
413 425Right-handed alpha
Helix 60
AG6
C
427 445Right-handed alpha
Helix 61
AG7
C
449 477Right-handed alpha
Helix 62
AG8
C
487 489Right-handed 310
Helix 63
AG9
C
490 522Right-handed alpha
Helix 64
AH1
C
537 542Right-handed 310
Helix 65
AH2
D
48 83Right-handed alpha
Helix 66
AH3
D
97 128Right-handed alpha
Helix 67
AH4
D
163 167Right-handed 310
Helix 68
AH5
D
173 183Right-handed alpha
Helix 69
AH6
D
186 190Right-handed 310
Helix 70
AH7
D
222 225Right-handed 310
Helix 71
AH8
D
259 263Right-handed 310
Helix 72
AH9
D
271 282Right-handed alpha
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There are 8 sheets in PDB entry 6PW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
523 524anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
246 250parallel
Strand 3
B
265 270anti-parallel
Strand 4
B
198 201parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 158first strand
Strand 2
B
144 149anti-parallel
Strand 3
B
134 141anti-parallel
Strand 4
B
205 212parallel
Strand 5
B
236 241anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 221first strand
Strand 2
B
226 230anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
446 447first strand
Strand 2
C
523 524anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 34first strand
Strand 2
D
246 250parallel
Strand 3
D
265 270anti-parallel
Strand 4
D
198 201parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 158first strand
Strand 2
D
144 149anti-parallel
Strand 3
D
134 141anti-parallel
Strand 4
D
205 212parallel
Strand 5
D
236 241anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
217 221first strand
Strand 2
D
226 230anti-parallel
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