Analysis of interatomic Contacts of Structural Units in PDB entry:
6PW2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6PW2 entry

There are 9 chains in PDB entry 6PW2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 461	PRO 607
B	LYS 461	PRO 607
C	LYS 461	PRO 607
D	LYS 461	PRO 607
E	A 3	T 59
F	C 5	G 57
I	LYS 461	PRO 607
J	LYS 461	PRO 607
K	LYS 461	PRO 589

There are 32 helices in PDB entry 6PW2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	475	489	Right-handed alpha
Helix 2	AA2	A	513	528	Right-handed alpha
Helix 3	AA3	A	568	586	Right-handed alpha
Helix 4	AA4	A	589	591	Right-handed 310
Helix 5	AA5	B	475	490	Right-handed alpha
Helix 6	AA6	B	513	528	Right-handed alpha
Helix 7	AA7	B	568	586	Right-handed alpha
Helix 8	AA8	B	589	591	Right-handed 310
Helix 9	AA9	C	475	491	Right-handed alpha
Helix 10	AB1	C	513	528	Right-handed alpha
Helix 11	AB2	C	568	585	Right-handed alpha
Helix 12	AB3	C	589	591	Right-handed 310
Helix 13	AB4	D	477	489	Right-handed alpha
Helix 14	AB5	D	513	528	Right-handed alpha
Helix 15	AB6	D	568	583	Right-handed alpha
Helix 16	AB7	D	589	591	Right-handed 310
Helix 17	AB8	I	475	491	Right-handed alpha
Helix 18	AB9	I	513	528	Right-handed alpha
Helix 19	AC1	I	568	585	Right-handed alpha
Helix 20	AC2	I	589	591	Right-handed 310
Helix 21	AC3	J	478	490	Right-handed alpha
Helix 22	AC4	J	513	528	Right-handed alpha
Helix 23	AC5	J	568	586	Right-handed alpha
Helix 24	AC6	J	589	591	Right-handed 310
Helix 25	AC7	K	475	491	Right-handed alpha
Helix 26	AC8	K	513	528	Right-handed alpha
Helix 27	AC9	K	568	586	Right-handed alpha
Helix 28	AD1	K	589	593	Right-handed 310
Helix 29	AD2	L	477	490	Right-handed alpha
Helix 30	AD3	L	513	528	Right-handed alpha
Helix 31	AD4	L	568	586	Right-handed alpha
Helix 32	AD5	L	589	591	Right-handed 310

There are 12 sheets in PDB entry 6PW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	532	533	first strand
Strand 2	A	556	566	anti-parallel
Strand 3	A	537	540	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	532	533	first strand
Strand 2	A	556	566	anti-parallel
Strand 3	A	503	511	anti-parallel
Strand 4	A	593	604	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	533	first strand
Strand 2	B	556	566	anti-parallel
Strand 3	B	537	540	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	532	533	first strand
Strand 2	B	556	566	anti-parallel
Strand 3	B	503	511	anti-parallel
Strand 4	B	593	604	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	532	533	first strand
Strand 2	C	556	566	anti-parallel
Strand 3	C	503	511	anti-parallel
Strand 4	C	593	604	anti-parallel
Strand 5	D	593	604	anti-parallel
Strand 6	D	503	511	anti-parallel
Strand 7	D	560	566	anti-parallel
Strand 8	D	532	533	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	540	first strand
Strand 2	C	556	566	anti-parallel
Strand 3	C	503	511	anti-parallel
Strand 4	C	593	604	anti-parallel
Strand 5	D	593	604	anti-parallel
Strand 6	D	503	511	anti-parallel
Strand 7	D	560	566	anti-parallel
Strand 8	D	537	538	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	532	533	first strand
Strand 2	I	556	566	anti-parallel
Strand 3	I	537	540	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	532	533	first strand
Strand 2	I	556	566	anti-parallel
Strand 3	I	505	511	anti-parallel
Strand 4	I	593	598	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	532	533	first strand
Strand 2	J	560	566	anti-parallel
Strand 3	J	537	538	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	532	533	first strand
Strand 2	J	560	566	anti-parallel
Strand 3	J	503	511	anti-parallel
Strand 4	J	593	604	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	532	533	first strand
Strand 2	K	556	566	anti-parallel
Strand 3	K	503	510	anti-parallel
Strand 4	K	594	604	anti-parallel
Strand 5	L	593	604	anti-parallel
Strand 6	L	503	511	anti-parallel
Strand 7	L	556	566	anti-parallel
Strand 8	L	532	533	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	537	540	first strand
Strand 2	K	556	566	anti-parallel
Strand 3	K	503	510	anti-parallel
Strand 4	K	594	604	anti-parallel
Strand 5	L	593	604	anti-parallel
Strand 6	L	503	511	anti-parallel
Strand 7	L	556	566	anti-parallel
Strand 8	L	537	540	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6PW2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6PW2