Analysis of interatomic Contacts of Structural Units in PDB entry:
6PW7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PW7 entry

There are 2 chains in PDB entry 6PW7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 25ASP 185
B
 VAL 25ASP 185
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6PW7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 40Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
64 74Right-handed alpha
Helix 4
AA4
A
78 91Right-handed alpha
Helix 5
AA5
A
98 108Right-handed alpha
Helix 6
AA6
A
109 113Right-handed 310
Helix 7
AA7
A
114 125Right-handed alpha
Helix 8
AA8
A
128 130Right-handed 310
Helix 9
AA9
A
131 139Right-handed alpha
Helix 10
AB1
A
141 143Right-handed 310
Helix 11
AB2
A
144 150Right-handed alpha
Helix 12
AB3
A
153 159Right-handed alpha
Helix 13
AB4
A
164 182Right-handed alpha
Helix 14
AB5
B
32 40Right-handed alpha
Helix 15
AB6
B
40 55Right-handed alpha
Helix 16
AB7
B
64 73Right-handed alpha
Helix 17
AB8
B
78 91Right-handed alpha
Helix 18
AB9
B
98 108Right-handed alpha
Helix 19
AC1
B
109 113Right-handed 310
Helix 20
AC2
B
114 125Right-handed alpha
Helix 21
AC3
B
128 130Right-handed 310
Helix 22
AC4
B
131 139Right-handed alpha
Helix 23
AC5
B
141 143Right-handed 310
Helix 24
AC6
B
144 150Right-handed alpha
Helix 25
AC7
B
153 159Right-handed alpha
Helix 26
AC8
B
164 182Right-handed alpha
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There are 2 sheets in PDB entry 6PW7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
95 97anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
95 97anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il