Analysis of interatomic Contacts of Structural Units in PDB entry:
6PWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6PWU entry

There are 5 chains in PDB entry 6PWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	ASP 1518
C	GLU 32	ASP 1518
E	GLU 32	ASP 1518
H	GLN 1	CYS 216
L	GLN 1	SER 210

There are 53 helices in PDB entry 6PWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	62	Right-handed alpha
Helix 2	AA2	A	99	117	Right-handed alpha
Helix 3	AA3	A	122	127	Right-handed 310
Helix 4	AA4	A	337	351	Right-handed alpha
Helix 5	AA5	A	368	373	Right-handed alpha
Helix 6	AA6	A	399	404	Right-handed alpha
Helix 7	AA7	A	420	424	Right-handed 310
Helix 8	AA8	A	469	476	Right-handed alpha
Helix 9	AA9	A	477	479	Right-handed 310
Helix 10	AB1	A	1385	1389	Right-handed 310
Helix 11	AB2	A	1392	1399	Right-handed alpha
Helix 12	AB3	A	1400	1407	Right-handed alpha
Helix 13	AB4	A	1423	1450	Right-handed alpha
Helix 14	AB5	A	1472	1479	Right-handed alpha
Helix 15	AB6	A	1482	1489	Right-handed alpha
Helix 16	AB7	A	1491	1507	Right-handed alpha
Helix 17	AB8	C	57	63	Right-handed alpha
Helix 18	AB9	C	99	117	Right-handed alpha
Helix 19	AC1	C	122	127	Right-handed 310
Helix 20	AC2	C	336	351	Right-handed alpha
Helix 21	AC3	C	368	373	Right-handed alpha
Helix 22	AC4	C	399	404	Right-handed alpha
Helix 23	AC5	C	420	424	Right-handed 310
Helix 24	AC6	C	470	475	Right-handed alpha
Helix 25	AC7	C	476	478	Right-handed 310
Helix 26	AC8	C	1385	1390	Right-handed 310
Helix 27	AC9	C	1391	1399	Right-handed alpha
Helix 28	AD1	C	1400	1407	Right-handed alpha
Helix 29	AD2	C	1423	1450	Right-handed alpha
Helix 30	AD3	C	1472	1479	Right-handed alpha
Helix 31	AD4	C	1482	1489	Right-handed alpha
Helix 32	AD5	C	1492	1507	Right-handed alpha
Helix 33	AD6	E	58	63	Right-handed alpha
Helix 34	AD7	E	99	117	Right-handed alpha
Helix 35	AD8	E	123	127	Right-handed 310
Helix 36	AD9	E	336	351	Right-handed alpha
Helix 37	AE1	E	368	373	Right-handed alpha
Helix 38	AE2	E	398	404	Right-handed alpha
Helix 39	AE3	E	420	424	Right-handed 310
Helix 40	AE4	E	470	475	Right-handed alpha
Helix 41	AE5	E	1385	1389	Right-handed 310
Helix 42	AE6	E	1390	1397	Right-handed alpha
Helix 43	AE7	E	1400	1407	Right-handed alpha
Helix 44	AE8	E	1423	1451	Right-handed alpha
Helix 45	AE9	E	1474	1479	Right-handed alpha
Helix 46	AF1	E	1483	1489	Right-handed alpha
Helix 47	AF2	E	1492	1507	Right-handed alpha
Helix 48	AF3	H	28	32	Right-handed 310
Helix 49	AF4	H	83	87	Right-handed 310
Helix 50	AF5	H	187	189	Right-handed 310
Helix 51	AF6	L	79	83	Right-handed 310
Helix 52	AF7	L	121	127	Right-handed alpha
Helix 53	AF8	L	181	188	Right-handed alpha

There are 39 sheets in PDB entry 6PWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	490	494	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	482	485	anti-parallel
Strand 3	A	226	231	anti-parallel
Strand 4	A	245	248	anti-parallel
Strand 5	A	83	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	94	first strand
Strand 2	A	239	242	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	132	first strand
Strand 2	A	155	162	anti-parallel
Strand 3	A	168	176	anti-parallel
Strand 4	H	100	100	parallel
Strand 5	H	100	100	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	194	196	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	206	first strand
Strand 2	A	428	430	parallel
Strand 3	A	418	419	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	274	277	first strand
Strand 2	A	286	290	anti-parallel
Strand 3	A	449	451	anti-parallel
Strand 4	A	462	465	anti-parallel
Strand 5	A	360	361	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	385	first strand
Strand 2	A	408	416	anti-parallel
Strand 3	A	332	336	anti-parallel
Strand 4	A	297	301	anti-parallel
Strand 5	A	438	440	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	311	first strand
Strand 2	A	317	320	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	494	first strand
Strand 2	C	35	40	anti-parallel
Strand 3	C	1458	1463	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	483	485	anti-parallel
Strand 3	C	226	231	anti-parallel
Strand 4	C	245	248	anti-parallel
Strand 5	C	84	86	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	53	56	parallel
Strand 3	C	219	221	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	162	first strand
Strand 2	C	169	176	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	183	first strand
Strand 2	C	194	196	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	206	first strand
Strand 2	C	428	430	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	274	277	first strand
Strand 2	C	286	290	anti-parallel
Strand 3	C	448	451	anti-parallel
Strand 4	C	462	465	anti-parallel
Strand 5	C	360	361	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	378	first strand
Strand 2	C	381	385	anti-parallel
Strand 3	C	409	416	anti-parallel
Strand 4	C	332	335	anti-parallel
Strand 5	C	296	301	anti-parallel
Strand 6	C	438	443	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	311	first strand
Strand 2	C	317	320	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	39	first strand
Strand 2	E	490	494	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	47	first strand
Strand 2	E	481	485	anti-parallel
Strand 3	E	226	231	anti-parallel
Strand 4	E	245	248	anti-parallel
Strand 5	E	84	86	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	75	76	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	93	first strand
Strand 2	E	240	242	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	132	first strand
Strand 2	E	155	162	anti-parallel
Strand 3	E	169	176	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	183	first strand
Strand 2	E	194	196	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	206	first strand
Strand 2	E	428	430	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	274	277	first strand
Strand 2	E	286	290	anti-parallel
Strand 3	E	446	451	anti-parallel
Strand 4	E	462	465	anti-parallel
Strand 5	E	360	361	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	374	378	first strand
Strand 2	E	381	385	anti-parallel
Strand 3	E	409	416	anti-parallel
Strand 4	E	332	335	anti-parallel
Strand 5	E	297	301	anti-parallel
Strand 6	E	438	442	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	308	311	first strand
Strand 2	E	317	320	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	19	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	93	anti-parallel
Strand 4	H	35	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	130	first strand
Strand 2	H	135	145	anti-parallel
Strand 3	H	176	185	anti-parallel
Strand 4	H	163	165	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	130	first strand
Strand 2	H	135	145	anti-parallel
Strand 3	H	176	185	anti-parallel
Strand 4	H	169	170	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	151	154	first strand
Strand 2	H	194	200	anti-parallel
Strand 3	H	205	211	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	102	106	parallel
Strand 3	L	84	91	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	48	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	102	106	parallel
Strand 3	L	84	91	anti-parallel
Strand 4	L	96	97	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	67	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	159	160	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	118	first strand
Strand 2	L	130	139	anti-parallel
Strand 3	L	172	180	anti-parallel
Strand 4	L	165	166	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	155	first strand
Strand 2	L	145	149	anti-parallel
Strand 3	L	191	196	anti-parallel
Strand 4	L	201	206	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6PWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6PWU