Analysis of interatomic Contacts of Structural Units in PDB entry:
6PX2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6PX2 entry

There are 4 chains in PDB entry 6PX2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	LYS 333
B	VAL 2	LYS 333
C	VAL 2	LYS 333
D	VAL 2	TYR 319

There are111 helices in PDB entry 6PX2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	21	Right-handed alpha
Helix 2	AA2	A	37	47	Right-handed alpha
Helix 3	AA3	A	79	83	Right-handed 310
Helix 4	AA4	A	84	89	Right-handed alpha
Helix 5	AA5	A	102	107	Right-handed alpha
Helix 6	AA6	A	107	112	Right-handed alpha
Helix 7	AA7	A	134	138	Right-handed 310
Helix 8	AA8	A	150	168	Right-handed alpha
Helix 9	AA9	A	194	199	Right-handed 310
Helix 10	AB1	A	211	220	Right-handed alpha
Helix 11	AB2	A	221	224	Right-handed 310
Helix 12	AB3	A	253	267	Right-handed alpha
Helix 13	AB4	A	281	286	Right-handed 310
Helix 14	AB5	A	316	332	Right-handed alpha
Helix 15	AB6	B	10	21	Right-handed alpha
Helix 16	AB7	B	37	47	Right-handed alpha
Helix 17	AB8	B	79	83	Right-handed 310
Helix 18	AB9	B	85	89	Right-handed 310
Helix 19	AC1	B	102	107	Right-handed alpha
Helix 20	AC2	B	108	113	Right-handed 310
Helix 21	AC3	B	134	138	Right-handed 310
Helix 22	AC4	B	150	168	Right-handed alpha
Helix 23	AC5	B	194	199	Right-handed 310
Helix 24	AC6	B	211	220	Right-handed alpha
Helix 25	AC7	B	221	224	Right-handed 310
Helix 26	AC8	B	253	267	Right-handed alpha
Helix 27	AC9	B	281	286	Right-handed 310
Helix 28	AD1	B	316	331	Right-handed alpha
Helix 29	AD2	C	10	21	Right-handed alpha
Helix 30	AD3	C	37	47	Right-handed alpha
Helix 31	AD4	C	79	83	Right-handed 310
Helix 32	AD5	C	84	89	Right-handed alpha
Helix 33	AD6	C	102	107	Right-handed alpha
Helix 34	AD7	C	107	112	Right-handed alpha
Helix 35	AD8	C	134	138	Right-handed 310
Helix 36	AD9	C	150	168	Right-handed alpha
Helix 37	AE1	C	194	199	Right-handed 310
Helix 38	AE2	C	211	220	Right-handed alpha
Helix 39	AE3	C	221	224	Right-handed 310
Helix 40	AE4	C	253	267	Right-handed alpha
Helix 41	AE5	C	281	286	Right-handed 310
Helix 42	AE6	C	316	333	Right-handed alpha
Helix 43	AE7	D	10	21	Right-handed alpha
Helix 44	AE8	D	37	47	Right-handed alpha
Helix 45	AE9	D	79	83	Right-handed 310
Helix 46	AF1	D	84	89	Right-handed alpha
Helix 47	AF2	D	102	107	Right-handed alpha
Helix 48	AF3	D	108	111	Right-handed 310
Helix 49	AF4	D	134	138	Right-handed 310
Helix 50	AF5	D	150	168	Right-handed alpha
Helix 51	AF6	D	194	199	Right-handed 310
Helix 52	AF7	D	211	220	Right-handed alpha
Helix 53	AF8	D	221	224	Right-handed 310
Helix 54	AF9	D	253	267	Right-handed alpha
Helix 55	AG1	D	281	286	Right-handed 310
Helix 56	AG2	D	316	332	Right-handed alpha
Helix 57	AG3	E	10	21	Right-handed alpha
Helix 58	AG4	E	37	47	Right-handed alpha
Helix 59	AG5	E	79	83	Right-handed 310
Helix 60	AG6	E	84	89	Right-handed alpha
Helix 61	AG7	E	102	107	Right-handed alpha
Helix 62	AG8	E	107	112	Right-handed alpha
Helix 63	AG9	E	134	138	Right-handed 310
Helix 64	AH1	E	150	168	Right-handed alpha
Helix 65	AH2	E	194	199	Right-handed 310
Helix 66	AH3	E	211	220	Right-handed alpha
Helix 67	AH4	E	221	224	Right-handed 310
Helix 68	AH5	E	253	267	Right-handed alpha
Helix 69	AH6	E	281	286	Right-handed 310
Helix 70	AH7	E	316	331	Right-handed alpha
Helix 71	AH8	F	10	21	Right-handed alpha
Helix 72	AH9	F	37	47	Right-handed alpha
Helix 73	AI1	F	79	83	Right-handed 310
Helix 74	AI2	F	84	89	Right-handed alpha
Helix 75	AI3	F	102	107	Right-handed alpha
Helix 76	AI4	F	107	112	Right-handed alpha
Helix 77	AI5	F	134	138	Right-handed 310
Helix 78	AI6	F	150	168	Right-handed alpha
Helix 79	AI7	F	194	199	Right-handed 310
Helix 80	AI8	F	211	220	Right-handed alpha
Helix 81	AI9	F	221	224	Right-handed 310
Helix 82	AJ1	F	253	267	Right-handed alpha
Helix 83	AJ2	F	281	286	Right-handed 310
Helix 84	AJ3	F	316	332	Right-handed alpha
Helix 85	AJ4	G	10	21	Right-handed alpha
Helix 86	AJ5	G	37	47	Right-handed alpha
Helix 87	AJ6	G	79	83	Right-handed 310
Helix 88	AJ7	G	84	89	Right-handed alpha
Helix 89	AJ8	G	102	107	Right-handed alpha
Helix 90	AJ9	G	107	112	Right-handed alpha
Helix 91	AK1	G	134	138	Right-handed 310
Helix 92	AK2	G	150	168	Right-handed alpha
Helix 93	AK3	G	194	199	Right-handed 310
Helix 94	AK4	G	211	220	Right-handed alpha
Helix 95	AK5	G	221	224	Right-handed 310
Helix 96	AK6	G	253	267	Right-handed alpha
Helix 97	AK7	G	281	286	Right-handed 310
Helix 98	AK8	G	316	332	Right-handed alpha
Helix 99	AK9	H	10	21	Right-handed alpha
Helix 100	AL1	H	37	47	Right-handed alpha
Helix 101	AL2	H	79	83	Right-handed 310
Helix 102	AL3	H	102	107	Right-handed alpha
Helix 103	AL4	H	107	112	Right-handed alpha
Helix 104	AL5	H	134	138	Right-handed 310
Helix 105	AL6	H	150	168	Right-handed alpha
Helix 106	AL7	H	194	199	Right-handed 310
Helix 107	AL8	H	211	220	Right-handed alpha
Helix 108	AL9	H	221	224	Right-handed 310
Helix 109	AM1	H	253	267	Right-handed alpha
Helix 110	AM2	H	281	286	Right-handed 310
Helix 111	AM3	H	316	332	Right-handed alpha

There are 24 sheets in PDB entry 6PX2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	64	67	anti-parallel
Strand 3	A	70	75	anti-parallel
Strand 4	A	27	32	parallel
Strand 5	A	3	7	parallel
Strand 6	A	92	95	parallel
Strand 7	A	116	119	parallel
Strand 8	A	145	147	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	208	first strand
Strand 2	A	227	234	anti-parallel
Strand 3	A	169	179	parallel
Strand 4	A	240	248	anti-parallel
Strand 5	A	306	313	anti-parallel
Strand 6	A	292	295	anti-parallel
Strand 7	A	273	276	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	208	first strand
Strand 2	A	227	234	anti-parallel
Strand 3	A	169	179	parallel
Strand 4	A	240	248	anti-parallel
Strand 5	A	306	313	anti-parallel
Strand 6	A	300	303	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	61	first strand
Strand 2	B	64	67	anti-parallel
Strand 3	B	70	75	anti-parallel
Strand 4	B	27	32	parallel
Strand 5	B	3	7	parallel
Strand 6	B	92	95	parallel
Strand 7	B	116	119	parallel
Strand 8	B	145	147	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	227	234	anti-parallel
Strand 3	B	169	179	parallel
Strand 4	B	240	248	anti-parallel
Strand 5	B	306	313	anti-parallel
Strand 6	B	292	295	anti-parallel
Strand 7	B	273	276	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	208	first strand
Strand 2	B	227	234	anti-parallel
Strand 3	B	169	179	parallel
Strand 4	B	240	248	anti-parallel
Strand 5	B	306	313	anti-parallel
Strand 6	B	300	303	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	61	first strand
Strand 2	C	64	67	anti-parallel
Strand 3	C	70	75	anti-parallel
Strand 4	C	27	32	parallel
Strand 5	C	3	7	parallel
Strand 6	C	92	95	parallel
Strand 7	C	116	119	parallel
Strand 8	C	145	147	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	208	first strand
Strand 2	C	227	234	anti-parallel
Strand 3	C	169	179	parallel
Strand 4	C	240	248	anti-parallel
Strand 5	C	306	313	anti-parallel
Strand 6	C	292	295	anti-parallel
Strand 7	C	273	276	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	208	first strand
Strand 2	C	227	234	anti-parallel
Strand 3	C	169	179	parallel
Strand 4	C	240	248	anti-parallel
Strand 5	C	306	313	anti-parallel
Strand 6	C	300	303	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	61	first strand
Strand 2	D	64	67	anti-parallel
Strand 3	D	70	75	anti-parallel
Strand 4	D	27	32	parallel
Strand 5	D	3	7	parallel
Strand 6	D	92	95	parallel
Strand 7	D	116	119	parallel
Strand 8	D	145	147	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	208	first strand
Strand 2	D	227	234	anti-parallel
Strand 3	D	169	179	parallel
Strand 4	D	240	248	anti-parallel
Strand 5	D	306	313	anti-parallel
Strand 6	D	292	295	anti-parallel
Strand 7	D	273	276	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	208	first strand
Strand 2	D	227	234	anti-parallel
Strand 3	D	169	179	parallel
Strand 4	D	240	248	anti-parallel
Strand 5	D	306	313	anti-parallel
Strand 6	D	300	303	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	61	first strand
Strand 2	E	64	67	anti-parallel
Strand 3	E	70	75	anti-parallel
Strand 4	E	27	32	parallel
Strand 5	E	3	7	parallel
Strand 6	E	92	95	parallel
Strand 7	E	116	119	parallel
Strand 8	E	145	147	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	206	208	first strand
Strand 2	E	227	234	anti-parallel
Strand 3	E	169	179	parallel
Strand 4	E	240	248	anti-parallel
Strand 5	E	306	313	anti-parallel
Strand 6	E	292	295	anti-parallel
Strand 7	E	273	276	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	206	208	first strand
Strand 2	E	227	234	anti-parallel
Strand 3	E	169	179	parallel
Strand 4	E	240	248	anti-parallel
Strand 5	E	306	313	anti-parallel
Strand 6	E	300	303	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	61	first strand
Strand 2	F	64	67	anti-parallel
Strand 3	F	71	75	anti-parallel
Strand 4	F	27	32	parallel
Strand 5	F	3	7	parallel
Strand 6	F	92	95	parallel
Strand 7	F	116	119	parallel
Strand 8	F	145	147	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	208	first strand
Strand 2	F	227	234	anti-parallel
Strand 3	F	169	179	parallel
Strand 4	F	240	248	anti-parallel
Strand 5	F	306	313	anti-parallel
Strand 6	F	292	295	anti-parallel
Strand 7	F	273	276	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	208	first strand
Strand 2	F	227	234	anti-parallel
Strand 3	F	169	179	parallel
Strand 4	F	240	248	anti-parallel
Strand 5	F	306	313	anti-parallel
Strand 6	F	300	303	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	61	first strand
Strand 2	G	64	67	anti-parallel
Strand 3	G	70	75	anti-parallel
Strand 4	G	27	32	parallel
Strand 5	G	3	7	parallel
Strand 6	G	92	95	parallel
Strand 7	G	116	119	parallel
Strand 8	G	145	147	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	206	208	first strand
Strand 2	G	227	234	anti-parallel
Strand 3	G	169	179	parallel
Strand 4	G	240	248	anti-parallel
Strand 5	G	306	313	anti-parallel
Strand 6	G	292	295	anti-parallel
Strand 7	G	273	276	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	206	208	first strand
Strand 2	G	227	234	anti-parallel
Strand 3	G	169	179	parallel
Strand 4	G	240	248	anti-parallel
Strand 5	G	306	313	anti-parallel
Strand 6	G	300	303	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	61	first strand
Strand 2	H	64	67	anti-parallel
Strand 3	H	70	75	anti-parallel
Strand 4	H	27	32	parallel
Strand 5	H	3	7	parallel
Strand 6	H	92	95	parallel
Strand 7	H	116	119	parallel
Strand 8	H	145	147	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	206	208	first strand
Strand 2	H	227	234	anti-parallel
Strand 3	H	169	179	parallel
Strand 4	H	240	248	anti-parallel
Strand 5	H	306	313	anti-parallel
Strand 6	H	292	295	anti-parallel
Strand 7	H	273	276	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	206	208	first strand
Strand 2	H	227	234	anti-parallel
Strand 3	H	169	179	parallel
Strand 4	H	240	248	anti-parallel
Strand 5	H	306	313	anti-parallel
Strand 6	H	300	303	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6PX2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6PX2