Analysis of interatomic Contacts of Structural Units in PDB entry:
6PYQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PYQ entry

There are 9 chains in PDB entry 6PYQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 139ARG 189
B
 ASP 452ILE 454
B
 ILE 456ILE 484
C
 GLN 139LYS 181
D
 ASP 452ILE 454
D
 ILE 456ILE 484
E
 ARG 141GLU 182
F
 ASP 452ILE 454
F
 ILE 456ILE 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6PYQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
139 182Right-handed alpha
Helix 2
AA2
A
183 189Right-handed alpha
Helix 3
AA3
B
453 483Right-handed alpha
Helix 4
AA4
C
139 181Right-handed alpha
Helix 5
AA5
D
453 483Right-handed alpha
Helix 6
AA6
E
142 181Right-handed alpha
Helix 7
AA7
F
453 483Right-handed alpha
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There are no sheets in PDB entry 6PYQ
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