Analysis of interatomic Contacts of Structural Units in PDB entry:
6PZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PZ7 entry

There is 1 chain in PDB entry 6PZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6ASN 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6PZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
41 52Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
75 92Right-handed alpha
Helix 5
AA5
A
110 133Right-handed alpha
Helix 6
AA6
A
160 181Right-handed alpha
Helix 7
AA7
A
182 187Right-handed 310
Helix 8
AA8
A
195 198Right-handed 310
Helix 9
AA9
A
200 207Right-handed alpha
Helix 10
AB1
A
209 213Right-handed 310
Helix 11
AB2
A
225 230Right-handed alpha
Helix 12
AB3
A
240 258Right-handed alpha
Helix 13
AB4
A
259 262Right-handed 310
Helix 14
AB5
A
277 295Right-handed alpha
Helix 15
AB6
A
326 335Right-handed alpha
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There are 2 sheets in PDB entry 6PZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
55 58parallel
Strand 3
A
95 99parallel
Strand 4
A
139 142parallel
Strand 5
A
190 193parallel
Strand 6
A
216 221parallel
Strand 7
A
265 270parallel
Strand 8
A
298 303parallel
Strand 9
A
19 22parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
323 324anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il