Analysis of interatomic Contacts of Structural Units in PDB entry:
6PZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PZ9 entry

There are 2 chains in PDB entry 6PZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 VAL 222VAL 1578
D
 MET 1GLU 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6PZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
223 228Right-handed alpha
Helix 2
AA2
C
230 232Right-handed 310
Helix 3
AA3
C
233 238Right-handed alpha
Helix 4
AA4
C
238 243Right-handed alpha
Helix 5
AA5
C
258 277Right-handed alpha
Helix 6
AA6
C
283 326Right-handed alpha
Helix 7
AA7
C
347 352Right-handed alpha
Helix 8
AA8
C
355 400Right-handed alpha
Helix 9
AA9
C
407 412Right-handed alpha
Helix 10
AB1
C
413 422Right-handed alpha
Helix 11
AB2
C
422 434Right-handed alpha
Helix 12
AB3
C
434 456Right-handed alpha
Helix 13
AB4
C
457 469Right-handed alpha
Helix 14
AB5
C
471 505Right-handed alpha
Helix 15
AB6
C
505 512Right-handed alpha
Helix 16
AB7
C
514 539Right-handed alpha
Helix 17
AB8
C
542 565Right-handed alpha
Helix 18
AB9
C
572 614Right-handed alpha
Helix 19
AC1
C
718 728Right-handed alpha
Helix 20
AC2
C
783 790Right-handed alpha
Helix 21
AC3
C
795 806Right-handed alpha
Helix 22
AC4
C
807 815Right-handed alpha
Helix 23
AC5
C
817 821Right-handed 310
Helix 24
AC6
C
831 846Right-handed alpha
Helix 25
AC7
C
862 881Right-handed alpha
Helix 26
AC8
C
913 919Right-handed alpha
Helix 27
AC9
C
922 928Right-handed alpha
Helix 28
AD1
C
996 1008Right-handed alpha
Helix 29
AD2
C
1009 1039Right-handed alpha
Helix 30
AD3
C
1061 1103Right-handed alpha
Helix 31
AD4
C
1109 1116Right-handed alpha
Helix 32
AD5
C
1117 1135Right-handed alpha
Helix 33
AD6
C
1135 1161Right-handed alpha
Helix 34
AD7
C
1163 1210Right-handed alpha
Helix 35
AD8
C
1210 1217Right-handed alpha
Helix 36
AD9
C
1219 1272Right-handed alpha
Helix 37
AE1
C
1281 1292Right-handed alpha
Helix 38
AE2
C
1294 1319Right-handed alpha
Helix 39
AE3
C
1384 1392Right-handed alpha
Helix 40
AE4
C
1411 1413Right-handed 310
Helix 41
AE5
C
1414 1421Right-handed alpha
Helix 42
AE6
C
1435 1441Right-handed alpha
Helix 43
AE7
C
1448 1459Right-handed alpha
Helix 44
AE8
C
1460 1466Right-handed alpha
Helix 45
AE9
C
1484 1499Right-handed alpha
Helix 46
AF1
C
1512 1531Right-handed alpha
Helix 47
AF2
C
1565 1570Right-handed alpha
Helix 48
AF3
C
1570 1578Right-handed alpha
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There are 7 sheets in PDB entry 6PZ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
680 681first strand
Strand 2
C
737 738anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
685 687first strand
Strand 2
C
731 734anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
709 711first strand
Strand 2
C
883 887parallel
Strand 3
C
850 854parallel
Strand 4
C
771 773parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
901 904first strand
Strand 2
C
907 911anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1360 1368first strand
Strand 2
C
1346 1353anti-parallel
Strand 3
C
1402 1405anti-parallel
Strand 4
C
1408 1409anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1423 1425first strand
Strand 2
C
1503 1505parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1549 1552first strand
Strand 2
C
1557 1561anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il