Analysis of interatomic Contacts of Structural Units in PDB entry:
6PZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PZA entry

There are 2 chains in PDB entry 6PZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1VAL 1578
D
 MET 1GLU 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6PZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
12 16Right-handed 310
Helix 2
AA2
C
26 55Right-handed alpha
Helix 3
AA3
C
58 63Right-handed 310
Helix 4
AA4
C
71 97Right-handed alpha
Helix 5
AA5
C
108 130Right-handed alpha
Helix 6
AA6
C
132 135Right-handed 310
Helix 7
AA7
C
136 160Right-handed alpha
Helix 8
AA8
C
166 194Right-handed alpha
Helix 9
AA9
C
207 212Right-handed alpha
Helix 10
AB1
C
223 230Right-handed alpha
Helix 11
AB2
C
232 238Right-handed alpha
Helix 12
AB3
C
239 242Right-handed 310
Helix 13
AB4
C
254 257Right-handed 310
Helix 14
AB5
C
258 277Right-handed alpha
Helix 15
AB6
C
283 314Right-handed alpha
Helix 16
AB7
C
316 328Right-handed alpha
Helix 17
AB8
C
329 332Right-handed 310
Helix 18
AB9
C
347 352Right-handed alpha
Helix 19
AC1
C
355 398Right-handed alpha
Helix 20
AC2
C
413 432Right-handed alpha
Helix 21
AC3
C
436 456Right-handed alpha
Helix 22
AC4
C
457 468Right-handed alpha
Helix 23
AC5
C
470 504Right-handed alpha
Helix 24
AC6
C
505 512Right-handed alpha
Helix 25
AC7
C
515 564Right-handed alpha
Helix 26
AC8
C
572 615Right-handed alpha
Helix 27
AC9
C
718 727Right-handed alpha
Helix 28
AD1
C
785 790Right-handed alpha
Helix 29
AD2
C
795 806Right-handed alpha
Helix 30
AD3
C
808 815Right-handed alpha
Helix 31
AD4
C
831 846Right-handed alpha
Helix 32
AD5
C
862 879Right-handed alpha
Helix 33
AD6
C
996 1009Right-handed alpha
Helix 34
AD7
C
1009 1043Right-handed alpha
Helix 35
AD8
C
1061 1107Right-handed alpha
Helix 36
AD9
C
1109 1116Right-handed alpha
Helix 37
AE1
C
1117 1135Right-handed alpha
Helix 38
AE2
C
1135 1161Right-handed alpha
Helix 39
AE3
C
1163 1210Right-handed alpha
Helix 40
AE4
C
1210 1218Right-handed alpha
Helix 41
AE5
C
1219 1273Right-handed alpha
Helix 42
AE6
C
1278 1292Right-handed alpha
Helix 43
AE7
C
1294 1320Right-handed alpha
Helix 44
AE8
C
1385 1392Right-handed alpha
Helix 45
AE9
C
1414 1419Right-handed alpha
Helix 46
AF1
C
1435 1441Right-handed alpha
Helix 47
AF2
C
1447 1458Right-handed alpha
Helix 48
AF3
C
1460 1465Right-handed alpha
Helix 49
AF4
C
1484 1498Right-handed alpha
Helix 50
AF5
C
1512 1531Right-handed alpha
Helix 51
AF6
C
1539 1543Right-handed 310
Helix 52
AF7
C
1564 1570Right-handed alpha
Helix 53
AF8
C
1571 1578Right-handed alpha
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There are 8 sheets in PDB entry 6PZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
338 340first strand
Strand 2
C
343 345anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
702 703first strand
Strand 2
C
679 681anti-parallel
Strand 3
C
737 738anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
852 853first strand
Strand 2
C
884 887parallel
Strand 3
C
708 713parallel
Strand 4
C
901 904parallel
Strand 5
C
907 911anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1366 1368first strand
Strand 2
C
1346 1348anti-parallel
Strand 3
C
1402 1405anti-parallel
Strand 4
C
1408 1409anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1352 1353first strand
Strand 2
C
1397 1398anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1375 1376first strand
Strand 2
C
1534 1535parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1422 1424first strand
Strand 2
C
1502 1504parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1549 1551first strand
Strand 2
C
1559 1561anti-parallel
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