Analysis of interatomic Contacts of Structural Units in PDB entry:
6PZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PZK entry

There are 5 chains in PDB entry 6PZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 11PHE 1460
B
 ILE 131GLU 228
C
 ASN 130LEU 186
D
 ASN 130GLU 184
E
 ILE 131ARG 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 6PZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
55 63Right-handed alpha
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
83 93Right-handed alpha
Helix 6
AA6
A
98 131Right-handed alpha
Helix 7
AA7
A
187 197Right-handed alpha
Helix 8
AA8
A
201 228Right-handed alpha
Helix 9
AA9
A
265 296Right-handed alpha
Helix 10
AB1
A
306 325Right-handed alpha
Helix 11
AB2
A
328 333Right-handed alpha
Helix 12
AB3
A
334 348Right-handed alpha
Helix 13
AB4
A
349 379Right-handed alpha
Helix 14
AB5
A
389 394Right-handed alpha
Helix 15
AB6
A
396 413Right-handed alpha
Helix 16
AB7
A
415 422Right-handed alpha
Helix 17
AB8
A
423 427Right-handed 310
Helix 18
AB9
A
437 449Right-handed alpha
Helix 19
AC1
A
455 478Right-handed alpha
Helix 20
AC2
A
485 489Right-handed 310
Helix 21
AC3
A
490 499Right-handed alpha
Helix 22
AC4
A
511 516Right-handed alpha
Helix 23
AC5
A
517 519Right-handed 310
Helix 24
AC6
A
532 537Right-handed alpha
Helix 25
AC7
A
545 553Right-handed 310
Helix 26
AC8
A
554 558Right-handed 310
Helix 27
AC9
A
559 570Right-handed alpha
Helix 28
AD1
A
571 573Right-handed 310
Helix 29
AD2
A
576 580Right-handed 310
Helix 30
AD3
A
581 588Right-handed alpha
Helix 31
AD4
A
593 596Right-handed 310
Helix 32
AD5
A
597 602Right-handed alpha
Helix 33
AD6
A
633 651Right-handed alpha
Helix 34
AD7
A
652 655Right-handed 310
Helix 35
AD8
A
703 708Right-handed alpha
Helix 36
AD9
A
709 712Right-handed 310
Helix 37
AE1
A
713 724Right-handed alpha
Helix 38
AE2
A
731 737Right-handed alpha
Helix 39
AE3
A
738 740Right-handed 310
Helix 40
AE4
A
781 800Right-handed alpha
Helix 41
AE5
A
828 850Right-handed alpha
Helix 42
AE6
A
868 872Right-handed 310
Helix 43
AE7
A
882 888Right-handed alpha
Helix 44
AE8
A
900 913Right-handed alpha
Helix 45
AE9
A
913 918Right-handed alpha
Helix 46
AF1
A
921 939Right-handed alpha
Helix 47
AF2
A
940 944Right-handed 310
Helix 48
AF3
A
949 966Right-handed alpha
Helix 49
AF4
A
970 979Right-handed alpha
Helix 50
AF5
A
982 986Right-handed 310
Helix 51
AF6
A
1003 1021Right-handed alpha
Helix 52
AF7
A
1034 1045Right-handed alpha
Helix 53
AF8
A
1054 1060Right-handed alpha
Helix 54
AF9
A
1072 1086Right-handed alpha
Helix 55
AG1
A
1090 1110Right-handed alpha
Helix 56
AG2
A
1118 1129Right-handed alpha
Helix 57
AG3
A
1130 1142Right-handed alpha
Helix 58
AG4
A
1146 1153Right-handed 310
Helix 59
AG5
A
1158 1180Right-handed alpha
Helix 60
AG6
A
1183 1188Right-handed alpha
Helix 61
AG7
A
1198 1210Right-handed alpha
Helix 62
AG8
A
1223 1227Right-handed alpha
Helix 63
AG9
A
1277 1281Right-handed 310
Helix 64
AH1
A
1282 1299Right-handed alpha
Helix 65
AH2
A
1300 1302Right-handed 310
Helix 66
AH3
A
1304 1316Right-handed alpha
Helix 67
AH4
A
1320 1325Right-handed alpha
Helix 68
AH5
A
1326 1328Right-handed 310
Helix 69
AH6
A
1354 1359Right-handed 310
Helix 70
AH7
A
1365 1375Right-handed alpha
Helix 71
AH8
A
1384 1404Right-handed alpha
Helix 72
AH9
A
1416 1419Right-handed 310
Helix 73
AI1
A
1432 1443Right-handed alpha
Helix 74
AI2
A
1444 1447Right-handed 310
Helix 75
AI3
A
1452 1460Right-handed alpha
Helix 76
AI4
B
132 150Right-handed alpha
Helix 77
AI5
B
161 164Right-handed 310
Helix 78
AI6
B
174 183Right-handed alpha
Helix 79
AI7
B
190 199Right-handed alpha
Helix 80
AI8
B
203 210Right-handed alpha
Helix 81
AI9
B
217 228Right-handed alpha
Helix 82
AJ1
C
131 157Right-handed alpha
Helix 83
AJ2
C
158 164Right-handed alpha
Helix 84
AJ3
C
167 172Right-handed alpha
Helix 85
AJ4
C
174 185Right-handed alpha
Helix 86
AJ5
D
131 156Right-handed alpha
Helix 87
AJ6
D
159 182Right-handed alpha
Helix 88
AJ7
E
132 155Right-handed alpha
Helix 89
AJ8
E
175 199Right-handed alpha
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There are 8 sheets in PDB entry 6PZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
260 264parallel
Strand 3
A
250 255anti-parallel
Strand 4
A
242 247anti-parallel
Strand 5
A
233 235anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
B
152 155anti-parallel
Strand 3
B
170 173anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 631first strand
Strand 2
A
614 617anti-parallel
Strand 3
A
742 744parallel
Strand 4
A
769 770anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
803 809first strand
Strand 2
A
812 821anti-parallel
Strand 3
A
691 700anti-parallel
Strand 4
A
860 863anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
873 875first strand
Strand 2
A
878 880anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1228 1231first strand
Strand 2
A
1409 1414anti-parallel
Strand 3
A
1241 1245anti-parallel
Strand 4
A
1361 1364anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1271 1272first strand
Strand 2
A
1330 1331anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
166 167anti-parallel
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