Analysis of interatomic Contacts of Structural Units in PDB entry:
6PZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PZR entry

There are 2 chains in PDB entry 6PZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 441ARG 798
B
 SER 441LEU 797
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6PZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
449 455Right-handed 310
Helix 2
AA2
A
467 480Right-handed alpha
Helix 3
AA3
A
482 486Right-handed 310
Helix 4
AA4
A
495 500Right-handed alpha
Helix 5
AA5
A
504 514Right-handed alpha
Helix 6
AA6
A
515 517Right-handed 310
Helix 7
AA7
A
518 528Right-handed alpha
Helix 8
AA8
A
537 558Right-handed alpha
Helix 9
AA9
A
587 599Right-handed alpha
Helix 10
AB1
A
616 624Right-handed alpha
Helix 11
AB2
A
646 650Right-handed 310
Helix 12
AB3
A
656 660Right-handed 310
Helix 13
AB4
A
674 685Right-handed alpha
Helix 14
AB5
A
685 694Right-handed alpha
Helix 15
AB6
A
718 730Right-handed alpha
Helix 16
AB7
A
731 735Right-handed 310
Helix 17
AB8
A
746 762Right-handed alpha
Helix 18
AB9
A
776 791Right-handed alpha
Helix 19
AC1
B
449 455Right-handed 310
Helix 20
AC2
B
467 480Right-handed alpha
Helix 21
AC3
B
482 486Right-handed 310
Helix 22
AC4
B
495 500Right-handed alpha
Helix 23
AC5
B
504 514Right-handed alpha
Helix 24
AC6
B
515 517Right-handed 310
Helix 25
AC7
B
518 528Right-handed alpha
Helix 26
AC8
B
537 558Right-handed alpha
Helix 27
AC9
B
587 599Right-handed alpha
Helix 28
AD1
B
616 623Right-handed alpha
Helix 29
AD2
B
646 650Right-handed 310
Helix 30
AD3
B
656 660Right-handed 310
Helix 31
AD4
B
674 685Right-handed alpha
Helix 32
AD5
B
685 694Right-handed alpha
Helix 33
AD6
B
718 730Right-handed alpha
Helix 34
AD7
B
731 735Right-handed 310
Helix 35
AD8
B
746 762Right-handed alpha
Helix 36
AD9
B
776 791Right-handed alpha
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There are 2 sheets in PDB entry 6PZR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 488first strand
Strand 2
A
444 447parallel
Strand 3
A
563 566parallel
Strand 4
A
737 741parallel
Strand 5
A
697 702parallel
Strand 6
A
606 610parallel
Strand 7
A
629 636parallel
Strand 8
A
663 668parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
487 488first strand
Strand 2
B
444 447parallel
Strand 3
B
563 566parallel
Strand 4
B
737 741parallel
Strand 5
B
697 702parallel
Strand 6
B
606 610parallel
Strand 7
B
629 636parallel
Strand 8
B
663 668parallel
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