Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q0X entry

There are 4 chains in PDB entry 6Q0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 129THR 501
B
 ALA 129THR 501
C
 ALA 129THR 501
D
 ALA 129THR 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6Q0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
173 187Right-handed alpha
Helix 2
AA2
A
207 227Right-handed alpha
Helix 3
AA3
A
227 233Right-handed alpha
Helix 4
AA4
A
233 241Right-handed alpha
Helix 5
AA5
A
245 252Right-handed alpha
Helix 6
AA6
A
254 258Right-handed 310
Helix 7
AA7
A
277 330Right-handed alpha
Helix 8
AA8
A
341 421Right-handed alpha
Helix 9
AA9
A
428 501Right-handed alpha
Helix 10
AB1
B
173 187Right-handed alpha
Helix 11
AB2
B
207 227Right-handed alpha
Helix 12
AB3
B
227 233Right-handed alpha
Helix 13
AB4
B
233 241Right-handed alpha
Helix 14
AB5
B
245 252Right-handed alpha
Helix 15
AB6
B
254 258Right-handed 310
Helix 16
AB7
B
277 330Right-handed alpha
Helix 17
AB8
B
341 421Right-handed alpha
Helix 18
AB9
B
428 501Right-handed alpha
Helix 19
AC1
C
173 187Right-handed alpha
Helix 20
AC2
C
207 227Right-handed alpha
Helix 21
AC3
C
227 233Right-handed alpha
Helix 22
AC4
C
233 241Right-handed alpha
Helix 23
AC5
C
245 252Right-handed alpha
Helix 24
AC6
C
254 258Right-handed 310
Helix 25
AC7
C
277 330Right-handed alpha
Helix 26
AC8
C
341 421Right-handed alpha
Helix 27
AC9
C
428 501Right-handed alpha
Helix 28
AD1
D
173 187Right-handed alpha
Helix 29
AD2
D
207 227Right-handed alpha
Helix 30
AD3
D
227 233Right-handed alpha
Helix 31
AD4
D
233 241Right-handed alpha
Helix 32
AD5
D
245 252Right-handed alpha
Helix 33
AD6
D
254 258Right-handed 310
Helix 34
AD7
D
277 330Right-handed alpha
Helix 35
AD8
D
341 421Right-handed alpha
Helix 36
AD9
D
428 501Right-handed alpha
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There are 4 sheets in PDB entry 6Q0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 137first strand
Strand 2
A
149 153anti-parallel
Strand 3
A
168 172anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 137first strand
Strand 2
B
149 153anti-parallel
Strand 3
B
168 172anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 137first strand
Strand 2
C
149 153anti-parallel
Strand 3
C
168 172anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
132 137first strand
Strand 2
D
149 153anti-parallel
Strand 3
D
168 172anti-parallel
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