Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q1H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Q1H entry

There are 3 chains in PDB entry 6Q1H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LYS 241
B	SER 2	LYS 241
C	SER 2	GLU 159

There are 42 helices in PDB entry 6Q1H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	28	Right-handed alpha
Helix 2	AA2	A	30	50	Right-handed alpha
Helix 3	AA3	A	110	126	Right-handed alpha
Helix 4	AA4	A	165	174	Right-handed alpha
Helix 5	AA5	A	208	223	Right-handed alpha
Helix 6	AA6	A	231	237	Right-handed alpha
Helix 7	AA7	A	238	240	Right-handed 310
Helix 8	AA8	B	5	28	Right-handed alpha
Helix 9	AA9	B	30	50	Right-handed alpha
Helix 10	AB1	B	110	126	Right-handed alpha
Helix 11	AB2	B	165	174	Right-handed alpha
Helix 12	AB3	B	208	225	Right-handed alpha
Helix 13	AB4	B	231	237	Right-handed alpha
Helix 14	AB5	B	238	240	Right-handed 310
Helix 15	AB6	C	5	28	Right-handed alpha
Helix 16	AB7	C	30	50	Right-handed alpha
Helix 17	AB8	C	110	126	Right-handed alpha
Helix 18	AB9	C	165	174	Right-handed alpha
Helix 19	AC1	C	208	225	Right-handed alpha
Helix 20	AC2	C	231	237	Right-handed alpha
Helix 21	AC3	C	238	240	Right-handed 310
Helix 22	AC4	E	5	28	Right-handed alpha
Helix 23	AC5	E	30	50	Right-handed alpha
Helix 24	AC6	E	110	126	Right-handed alpha
Helix 25	AC7	E	165	174	Right-handed alpha
Helix 26	AC8	E	208	225	Right-handed alpha
Helix 27	AC9	E	231	237	Right-handed alpha
Helix 28	AD1	E	238	240	Right-handed 310
Helix 29	AD2	F	5	28	Right-handed alpha
Helix 30	AD3	F	30	50	Right-handed alpha
Helix 31	AD4	F	110	126	Right-handed alpha
Helix 32	AD5	F	165	174	Right-handed alpha
Helix 33	AD6	F	208	225	Right-handed alpha
Helix 34	AD7	F	231	237	Right-handed alpha
Helix 35	AD8	F	238	241	Right-handed 310
Helix 36	AD9	G	5	28	Right-handed alpha
Helix 37	AE1	G	30	50	Right-handed alpha
Helix 38	AE2	G	110	126	Right-handed alpha
Helix 39	AE3	G	165	174	Right-handed alpha
Helix 40	AE4	G	208	225	Right-handed alpha
Helix 41	AE5	G	231	236	Right-handed alpha
Helix 42	AE6	G	237	240	Right-handed 310

There are 18 sheets in PDB entry 6Q1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	88	first strand
Strand 2	A	91	95	anti-parallel
Strand 3	A	55	62	parallel
Strand 4	A	72	77	anti-parallel
Strand 5	A	99	105	anti-parallel
Strand 6	A	150	155	parallel
Strand 7	A	183	186	parallel
Strand 8	A	190	195	anti-parallel
Strand 9	A	200	205	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	157	158	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	136	first strand
Strand 2	A	139	141	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	88	first strand
Strand 2	B	91	95	anti-parallel
Strand 3	B	55	62	parallel
Strand 4	B	72	77	anti-parallel
Strand 5	B	99	105	anti-parallel
Strand 6	B	150	155	parallel
Strand 7	B	183	186	parallel
Strand 8	B	190	195	anti-parallel
Strand 9	B	200	205	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	157	158	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	136	first strand
Strand 2	B	139	141	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	88	first strand
Strand 2	C	91	95	anti-parallel
Strand 3	C	55	62	parallel
Strand 4	C	72	77	anti-parallel
Strand 5	C	99	105	anti-parallel
Strand 6	C	150	155	parallel
Strand 7	C	183	186	parallel
Strand 8	C	190	195	anti-parallel
Strand 9	C	200	205	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	109	first strand
Strand 2	C	157	158	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	136	first strand
Strand 2	C	139	141	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	88	first strand
Strand 2	E	91	95	anti-parallel
Strand 3	E	55	62	parallel
Strand 4	E	72	77	anti-parallel
Strand 5	E	99	105	anti-parallel
Strand 6	E	150	155	parallel
Strand 7	E	183	186	parallel
Strand 8	E	190	195	anti-parallel
Strand 9	E	200	205	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	109	first strand
Strand 2	E	157	158	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	136	first strand
Strand 2	E	139	141	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	88	first strand
Strand 2	F	91	95	anti-parallel
Strand 3	F	55	62	parallel
Strand 4	F	72	77	anti-parallel
Strand 5	F	99	105	anti-parallel
Strand 6	F	150	155	parallel
Strand 7	F	183	186	parallel
Strand 8	F	190	195	anti-parallel
Strand 9	F	200	205	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	109	first strand
Strand 2	F	157	158	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	134	136	first strand
Strand 2	F	139	141	anti-parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	86	88	first strand
Strand 2	G	91	95	anti-parallel
Strand 3	G	55	62	parallel
Strand 4	G	72	77	anti-parallel
Strand 5	G	99	105	anti-parallel
Strand 6	G	150	155	parallel
Strand 7	G	183	186	parallel
Strand 8	G	190	195	anti-parallel
Strand 9	G	200	205	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	109	first strand
Strand 2	G	157	158	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	134	136	first strand
Strand 2	G	139	141	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Q1H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q1H