Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q2E entry

There are 2 chains in PDB entry 6Q2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0PHE 329
B
 SER 2HIS 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6Q2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
28 33Right-handed 310
Helix 3
AA3
A
34 46Right-handed alpha
Helix 4
AA4
A
64 69Right-handed alpha
Helix 5
AA5
A
102 104Right-handed 310
Helix 6
AA6
A
105 113Right-handed alpha
Helix 7
AA7
A
125 129Right-handed 310
Helix 8
AA8
A
130 141Right-handed alpha
Helix 9
AA9
A
163 167Right-handed 310
Helix 10
AB1
A
181 192Right-handed alpha
Helix 11
AB2
A
208 227Right-handed alpha
Helix 12
AB3
A
239 243Right-handed 310
Helix 13
AB4
A
244 258Right-handed alpha
Helix 14
AB5
A
271 276Right-handed alpha
Helix 15
AB6
A
290 296Right-handed alpha
Helix 16
AB7
A
297 300Right-handed 310
Helix 17
AB8
A
306 314Right-handed alpha
Helix 18
AB9
A
318 322Right-handed 310
Helix 19
AC1
B
7 19Right-handed alpha
Helix 20
AC2
B
28 33Right-handed 310
Helix 21
AC3
B
34 46Right-handed alpha
Helix 22
AC4
B
59 63Right-handed 310
Helix 23
AC5
B
101 104Right-handed 310
Helix 24
AC6
B
105 113Right-handed alpha
Helix 25
AC7
B
125 129Right-handed 310
Helix 26
AC8
B
130 141Right-handed alpha
Helix 27
AC9
B
163 167Right-handed 310
Helix 28
AD1
B
181 192Right-handed alpha
Helix 29
AD2
B
207 227Right-handed alpha
Helix 30
AD3
B
239 243Right-handed 310
Helix 31
AD4
B
244 258Right-handed alpha
Helix 32
AD5
B
271 276Right-handed 310
Helix 33
AD6
B
290 296Right-handed alpha
Helix 34
AD7
B
297 300Right-handed 310
Helix 35
AD8
B
306 314Right-handed alpha
Helix 36
AD9
B
318 322Right-handed 310
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There are 4 sheets in PDB entry 6Q2E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 94first strand
Strand 2
A
74 78parallel
Strand 3
A
22 26parallel
Strand 4
A
49 53parallel
Strand 5
B
261 267parallel
Strand 6
B
231 237parallel
Strand 7
B
283 286parallel
Strand 8
B
304 305parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
118 123parallel
Strand 3
A
173 177parallel
Strand 4
A
195 199parallel
Strand 5
A
204 207anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
283 286parallel
Strand 3
A
231 237parallel
Strand 4
A
261 267parallel
Strand 5
B
49 53parallel
Strand 6
B
22 26parallel
Strand 7
B
74 78parallel
Strand 8
B
91 94parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 146first strand
Strand 2
B
118 123parallel
Strand 3
B
173 177parallel
Strand 4
B
195 198parallel
Strand 5
B
205 206anti-parallel
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