Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q2N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Q2N entry

There are 6 chains in PDB entry 6Q2N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 117	CYS 210
C	LYS 150	SER 349
E	LEU 29	PRO 622
B	GLY 117	CYS 210
D	LYS 150	SER 349
F	LEU 29	PRO 622

There are 44 helices in PDB entry 6Q2N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	154	164	Right-handed alpha
Helix 2	AA2	C	152	164	Right-handed alpha
Helix 3	AA3	C	164	176	Right-handed alpha
Helix 4	AA4	C	177	179	Right-handed 310
Helix 5	AA5	C	188	203	Right-handed alpha
Helix 6	AA6	C	204	213	Right-handed alpha
Helix 7	AA7	C	218	227	Right-handed alpha
Helix 8	AA8	C	230	235	Right-handed alpha
Helix 9	AA9	C	242	252	Right-handed alpha
Helix 10	AB1	C	253	267	Right-handed alpha
Helix 11	AB2	C	281	290	Right-handed alpha
Helix 12	AB3	C	321	334	Right-handed alpha
Helix 13	AB4	C	335	348	Right-handed alpha
Helix 14	AB5	E	102	111	Right-handed alpha
Helix 15	AB6	E	156	160	Right-handed 310
Helix 16	AB7	E	162	167	Right-handed alpha
Helix 17	AB8	E	190	197	Right-handed alpha
Helix 18	AB9	E	309	314	Right-handed alpha
Helix 19	AC1	E	323	328	Right-handed alpha
Helix 20	AC2	E	429	433	Right-handed 310
Helix 21	AC3	E	524	530	Right-handed alpha
Helix 22	AC4	E	564	568	Right-handed 310
Helix 23	AC5	B	154	164	Right-handed alpha
Helix 24	AC6	D	152	164	Right-handed alpha
Helix 25	AC7	D	164	176	Right-handed alpha
Helix 26	AC8	D	177	179	Right-handed 310
Helix 27	AC9	D	188	203	Right-handed alpha
Helix 28	AD1	D	204	213	Right-handed alpha
Helix 29	AD2	D	218	227	Right-handed alpha
Helix 30	AD3	D	230	235	Right-handed alpha
Helix 31	AD4	D	242	252	Right-handed alpha
Helix 32	AD5	D	253	267	Right-handed alpha
Helix 33	AD6	D	281	290	Right-handed alpha
Helix 34	AD7	D	321	334	Right-handed alpha
Helix 35	AD8	D	335	348	Right-handed alpha
Helix 36	AD9	F	102	111	Right-handed alpha
Helix 37	AE1	F	156	160	Right-handed 310
Helix 38	AE2	F	162	167	Right-handed alpha
Helix 39	AE3	F	190	197	Right-handed alpha
Helix 40	AE4	F	309	314	Right-handed alpha
Helix 41	AE5	F	323	328	Right-handed alpha
Helix 42	AE6	F	429	433	Right-handed 310
Helix 43	AE7	F	524	530	Right-handed alpha
Helix 44	AE8	F	564	568	Right-handed 310

There are 36 sheets in PDB entry 6Q2N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	126	first strand
Strand 2	A	139	146	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	181	first strand
Strand 2	A	208	209	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	191	first strand
Strand 2	A	197	198	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	301	first strand
Strand 2	C	309	310	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	31	first strand
Strand 2	E	55	56	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	36	first strand
Strand 2	E	142	153	parallel
Strand 3	E	121	122	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	42	first strand
Strand 2	E	142	153	parallel
Strand 3	E	125	126	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	73	first strand
Strand 2	E	79	82	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	89	first strand
Strand 2	E	94	97	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	176	first strand
Strand 2	E	252	262	parallel
Strand 3	E	236	245	anti-parallel
Strand 4	E	202	206	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	187	first strand
Strand 2	E	222	225	anti-parallel
Strand 3	E	214	216	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	280	283	first strand
Strand 2	E	389	397	parallel
Strand 3	E	368	376	anti-parallel
Strand 4	E	316	319	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	292	298	first strand
Strand 2	E	346	358	anti-parallel
Strand 3	E	329	341	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	407	412	first strand
Strand 2	E	496	504	parallel
Strand 3	E	482	489	anti-parallel
Strand 4	E	438	445	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	424	425	first strand
Strand 2	E	462	467	anti-parallel
Strand 3	E	452	457	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	542	544	first strand
Strand 2	E	557	559	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	594	596	first strand
Strand 2	E	602	605	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	608	612	first strand
Strand 2	E	617	621	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	126	first strand
Strand 2	B	139	146	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	181	first strand
Strand 2	B	208	209	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	191	first strand
Strand 2	B	197	198	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	301	first strand
Strand 2	D	309	310	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	55	56	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	36	first strand
Strand 2	F	142	153	parallel
Strand 3	F	121	122	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	42	first strand
Strand 2	F	142	153	parallel
Strand 3	F	125	126	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	73	first strand
Strand 2	F	79	82	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	89	first strand
Strand 2	F	94	97	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	174	176	first strand
Strand 2	F	252	262	parallel
Strand 3	F	236	245	anti-parallel
Strand 4	F	202	206	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	184	187	first strand
Strand 2	F	222	225	anti-parallel
Strand 3	F	214	216	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	280	283	first strand
Strand 2	F	389	397	parallel
Strand 3	F	368	376	anti-parallel
Strand 4	F	316	319	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	292	298	first strand
Strand 2	F	346	358	anti-parallel
Strand 3	F	329	341	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	407	412	first strand
Strand 2	F	496	504	parallel
Strand 3	F	482	489	anti-parallel
Strand 4	F	438	445	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	424	425	first strand
Strand 2	F	462	467	anti-parallel
Strand 3	F	452	457	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	542	544	first strand
Strand 2	F	557	559	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	594	596	first strand
Strand 2	F	602	605	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	608	612	first strand
Strand 2	F	617	621	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Q2N

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q2N