Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q3R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q3R entry

There are 2 chains in PDB entry 6Q3R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 334
B
 ALA 1LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6Q3R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 19Right-handed alpha
Helix 2
AA2
A
31 39Right-handed alpha
Helix 3
AA3
A
58 72Right-handed alpha
Helix 4
AA4
A
102 124Right-handed alpha
Helix 5
AA5
A
136 140Right-handed 310
Helix 6
AA6
A
150 167Right-handed alpha
Helix 7
AA7
A
185 199Right-handed alpha
Helix 8
AA8
A
203 207Right-handed 310
Helix 9
AA9
A
223 239Right-handed alpha
Helix 10
AB1
A
261 265Right-handed 310
Helix 11
AB2
A
270 288Right-handed alpha
Helix 12
AB3
A
326 333Right-handed alpha
Helix 13
AB4
B
11 18Right-handed alpha
Helix 14
AB5
B
31 39Right-handed alpha
Helix 15
AB6
B
58 72Right-handed alpha
Helix 16
AB7
B
102 124Right-handed alpha
Helix 17
AB8
B
136 140Right-handed 310
Helix 18
AB9
B
147 149Right-handed 310
Helix 19
AC1
B
150 167Right-handed alpha
Helix 20
AC2
B
185 199Right-handed alpha
Helix 21
AC3
B
203 207Right-handed 310
Helix 22
AC4
B
223 239Right-handed alpha
Helix 23
AC5
B
261 265Right-handed 310
Helix 24
AC6
B
270 287Right-handed alpha
Helix 25
AC7
B
326 333Right-handed alpha
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There are 4 sheets in PDB entry 6Q3R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
43 48parallel
Strand 3
A
75 80parallel
Strand 4
A
130 133parallel
Strand 5
A
175 180parallel
Strand 6
A
209 213parallel
Strand 7
A
242 246parallel
Strand 8
A
291 297parallel
Strand 9
A
4 8parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
29 30anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
43 48parallel
Strand 3
B
75 80parallel
Strand 4
B
130 133parallel
Strand 5
B
175 180parallel
Strand 6
B
209 213parallel
Strand 7
B
242 246parallel
Strand 8
B
291 297parallel
Strand 9
B
4 8parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
29 30anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il