Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q4A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q4A entry

There is 1 chain in PDB entry 6Q4A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6Q4A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 55Right-handed alpha
Helix 2
AA2
A
56 58Right-handed 310
Helix 3
AA3
A
87 94Right-handed alpha
Helix 4
AA4
A
100 121Right-handed alpha
Helix 5
AA5
A
129 131Right-handed 310
Helix 6
AA6
A
148 153Right-handed alpha
Helix 7
AA7
A
170 175Right-handed alpha
Helix 8
AA8
A
182 199Right-handed alpha
Helix 9
AA9
A
207 220Right-handed alpha
Helix 10
AB1
A
229 233Right-handed 310
Helix 11
AB2
A
247 252Right-handed alpha
Helix 12
AB3
A
256 267Right-handed alpha
Helix 13
AB4
A
276 282Right-handed alpha
Helix 14
AB5
A
283 287Right-handed 310
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There are 2 sheets in PDB entry 6Q4A. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
17 23anti-parallel
Strand 3
A
29 35anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
66 72anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
133 135anti-parallel
Strand 3
A
141 143anti-parallel
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