Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q4M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q4M entry

There is 1 chain in PDB entry 6Q4M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 324ILE 1037
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6Q4M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
324 341Right-handed alpha
Helix 2
AA2
A
342 357Right-handed alpha
Helix 3
AA3
A
360 374Right-handed alpha
Helix 4
AA4
A
376 391Right-handed alpha
Helix 5
AA5
A
394 408Right-handed alpha
Helix 6
AA6
A
410 425Right-handed alpha
Helix 7
AA7
A
428 442Right-handed alpha
Helix 8
AA8
A
444 459Right-handed alpha
Helix 9
AA9
A
462 476Right-handed alpha
Helix 10
AB1
A
481 499Right-handed alpha
Helix 11
AB2
A
506 513Right-handed 310
Helix 12
AB3
A
516 537Right-handed alpha
Helix 13
AB4
A
549 553Right-handed 310
Helix 14
AB5
A
568 575Right-handed alpha
Helix 15
AB6
A
576 581Right-handed alpha
Helix 16
AB7
A
599 609Right-handed alpha
Helix 17
AB8
A
616 618Right-handed 310
Helix 18
AB9
A
620 630Right-handed alpha
Helix 19
AC1
A
648 653Right-handed alpha
Helix 20
AC2
A
685 692Right-handed 310
Helix 21
AC3
A
707 712Right-handed alpha
Helix 22
AC4
A
713 716Right-handed 310
Helix 23
AC5
A
740 747Right-handed alpha
Helix 24
AC6
A
780 793Right-handed alpha
Helix 25
AC7
A
809 814Right-handed alpha
Helix 26
AC8
A
814 819Right-handed alpha
Helix 27
AC9
A
833 836Right-handed 310
Helix 28
AD1
A
849 853Right-handed 310
Helix 29
AD2
A
854 868Right-handed alpha
Helix 30
AD3
A
879 881Right-handed 310
Helix 31
AD4
A
882 893Right-handed alpha
Helix 32
AD5
A
907 915Right-handed alpha
Helix 33
AD6
A
916 918Right-handed 310
Helix 34
AD7
A
930 939Right-handed alpha
Helix 35
AD8
A
950 953Right-handed 310
Helix 36
AD9
A
954 964Right-handed alpha
Helix 37
AE1
A
965 969Right-handed 310
Helix 38
AE2
A
972 986Right-handed alpha
Helix 39
AE3
A
986 1004Right-handed alpha
Helix 40
AE4
A
1008 1029Right-handed alpha
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There are 3 sheets in PDB entry 6Q4M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 614first strand
Strand 2
A
586 592parallel
Strand 3
A
556 562parallel
Strand 4
A
635 638parallel
Strand 5
A
658 661parallel
Strand 6
A
676 679parallel
Strand 7
A
695 698parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 755first strand
Strand 2
A
773 777anti-parallel
Strand 3
A
719 721parallel
Strand 4
A
734 737anti-parallel
Strand 5
A
827 831anti-parallel
Strand 6
A
802 806parallel
Strand 7
A
796 799anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
900 904first strand
Strand 2
A
872 877parallel
Strand 3
A
843 845parallel
Strand 4
A
920 922parallel
Strand 5
A
943 944parallel
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