Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q4Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q4Z entry

There are 2 chains in PDB entry 6Q4Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6PHE 321
B
 ALA 14PHE 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6Q4Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
177 181Right-handed 310
Helix 3
AA3
A
182 188Right-handed alpha
Helix 4
AA4
A
194 198Right-handed 310
Helix 5
AA5
A
258 262Right-handed 310
Helix 6
AA6
A
269 273Right-handed 310
Helix 7
AA7
B
177 181Right-handed 310
Helix 8
AA8
B
182 188Right-handed alpha
Helix 9
AA9
B
194 198Right-handed 310
Helix 10
AB1
B
258 262Right-handed 310
Helix 11
AB2
B
269 273Right-handed 310
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There are 12 sheets in PDB entry 6Q4Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
299 305anti-parallel
Strand 3
A
289 295anti-parallel
Strand 4
A
276 283anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
80 83parallel
Strand 3
A
69 77anti-parallel
Strand 4
A
52 60anti-parallel
Strand 5
A
39 41anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
80 83parallel
Strand 3
A
69 77anti-parallel
Strand 4
A
52 60anti-parallel
Strand 5
A
47 49anti-parallel
Strand 6
A
320 321parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 100first strand
Strand 2
A
103 114anti-parallel
Strand 3
A
117 129anti-parallel
Strand 4
A
132 138anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
156 160anti-parallel
Strand 3
A
171 175anti-parallel
Strand 4
A
190 191anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 209first strand
Strand 2
A
215 225anti-parallel
Strand 3
A
233 243anti-parallel
Strand 4
A
250 257anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
299 305anti-parallel
Strand 3
B
289 295anti-parallel
Strand 4
B
276 283anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 33first strand
Strand 2
B
80 83parallel
Strand 3
B
69 77anti-parallel
Strand 4
B
52 60anti-parallel
Strand 5
B
39 41anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 33first strand
Strand 2
B
80 83parallel
Strand 3
B
69 77anti-parallel
Strand 4
B
52 60anti-parallel
Strand 5
B
47 49anti-parallel
Strand 6
B
320 321parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 100first strand
Strand 2
B
103 114anti-parallel
Strand 3
B
117 129anti-parallel
Strand 4
B
132 138anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
156 162anti-parallel
Strand 3
B
169 175anti-parallel
Strand 4
B
190 191anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 209first strand
Strand 2
B
215 225anti-parallel
Strand 3
B
233 243anti-parallel
Strand 4
B
250 257anti-parallel
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