Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q5G entry

There are 2 chains in PDB entry 6Q5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 32GLU 447
B
 GLY 31LYS 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 6Q5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 63Right-handed alpha
Helix 2
AA2
A
74 88Right-handed alpha
Helix 3
AA3
A
101 107Right-handed alpha
Helix 4
AA4
A
114 119Right-handed 310
Helix 5
AA5
A
120 124Right-handed 310
Helix 6
AA6
A
126 133Right-handed alpha
Helix 7
AA7
A
155 162Right-handed alpha
Helix 8
AA8
A
164 168Right-handed 310
Helix 9
AA9
A
170 183Right-handed alpha
Helix 10
AB1
A
196 207Right-handed alpha
Helix 11
AB2
A
228 244Right-handed alpha
Helix 12
AB3
A
255 265Right-handed alpha
Helix 13
AB4
A
275 284Right-handed alpha
Helix 14
AB5
A
285 288Right-handed 310
Helix 15
AB6
A
321 334Right-handed alpha
Helix 16
AB7
A
336 344Right-handed alpha
Helix 17
AB8
A
350 356Right-handed alpha
Helix 18
AB9
A
380 391Right-handed alpha
Helix 19
AC1
A
401 414Right-handed alpha
Helix 20
AC2
A
414 419Right-handed alpha
Helix 21
AC3
A
422 441Right-handed alpha
Helix 22
AC4
B
50 63Right-handed alpha
Helix 23
AC5
B
73 88Right-handed alpha
Helix 24
AC6
B
101 108Right-handed alpha
Helix 25
AC7
B
114 119Right-handed 310
Helix 26
AC8
B
120 124Right-handed 310
Helix 27
AC9
B
126 133Right-handed alpha
Helix 28
AD1
B
155 161Right-handed alpha
Helix 29
AD2
B
164 168Right-handed 310
Helix 30
AD3
B
170 183Right-handed alpha
Helix 31
AD4
B
196 207Right-handed alpha
Helix 32
AD5
B
228 244Right-handed alpha
Helix 33
AD6
B
255 265Right-handed alpha
Helix 34
AD7
B
275 284Right-handed alpha
Helix 35
AD8
B
285 288Right-handed 310
Helix 36
AD9
B
321 334Right-handed alpha
Helix 37
AE1
B
336 344Right-handed alpha
Helix 38
AE2
B
350 356Right-handed alpha
Helix 39
AE3
B
356 361Right-handed alpha
Helix 40
AE4
B
380 391Right-handed alpha
Helix 41
AE5
B
401 419Right-handed alpha
Helix 42
AE6
B
422 441Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 6Q5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
41 45parallel
Strand 3
A
94 98parallel
Strand 4
A
311 315anti-parallel
Strand 5
A
142 145anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
138 139anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
149 154anti-parallel
Strand 3
A
291 294anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
220 223anti-parallel
Strand 3
A
444 446parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
372 373anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 69first strand
Strand 2
B
41 45parallel
Strand 3
B
94 98parallel
Strand 4
B
311 315anti-parallel
Strand 5
B
142 145anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 135first strand
Strand 2
B
138 139anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 273first strand
Strand 2
B
149 154anti-parallel
Strand 3
B
291 294anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 215first strand
Strand 2
B
220 223anti-parallel
Strand 3
B
444 446parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
372 373anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il