Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q69 entry

There are 4 chains in PDB entry 6Q69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 365ARG 529
B
 ILE 16VAL 58
C
 LEU 366ARG 529
D
 ILE 16VAL 58
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6Q69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
380 388Right-handed alpha
Helix 2
AA2
B
18 30Right-handed alpha
Helix 3
AA3
B
31 41Right-handed alpha
Helix 4
AA4
B
48 52Right-handed 310
Helix 5
AA5
C
379 390Right-handed alpha
Helix 6
AA6
D
18 30Right-handed alpha
Helix 7
AA7
D
31 41Right-handed alpha
Helix 8
AA8
D
48 52Right-handed 310
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There are 6 sheets in PDB entry 6Q69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
492 498anti-parallel
Strand 3
A
415 422anti-parallel
Strand 4
A
519 528anti-parallel
Strand 5
A
394 397anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
492 498anti-parallel
Strand 3
A
415 422anti-parallel
Strand 4
A
519 528anti-parallel
Strand 5
B
45 46anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 486first strand
Strand 2
A
427 435anti-parallel
Strand 3
A
503 510anti-parallel
Strand 4
A
402 408anti-parallel
Strand 5
B
53 57anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 377first strand
Strand 2
C
492 498anti-parallel
Strand 3
C
415 422anti-parallel
Strand 4
C
519 527anti-parallel
Strand 5
C
394 397anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 377first strand
Strand 2
C
492 498anti-parallel
Strand 3
C
415 422anti-parallel
Strand 4
C
519 527anti-parallel
Strand 5
D
45 46anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
477 486first strand
Strand 2
C
427 435anti-parallel
Strand 3
C
503 510anti-parallel
Strand 4
C
402 408anti-parallel
Strand 5
D
53 57anti-parallel
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