Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q75 entry

There are 2 chains in PDB entry 6Q75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 24ARG 333
B
VAL 24PHE 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6Q75. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
29 41Right-handed alpha
Helix 2
AA2
A
58 69Right-handed alpha
Helix 3
AA3
A
87 101Right-handed alpha
Helix 4
AA4
A
131 139Right-handed alpha
Helix 5
AA5
A
143 166Right-handed alpha
Helix 6
AA6
A
193 207Right-handed alpha
Helix 7
AA7
A
233 238Right-handed 310
Helix 8
AA8
A
240 244Right-handed 310
Helix 9
AA9
A
257 269Right-handed alpha
Helix 10
AB1
A
283 290Right-handed alpha
Helix 11
AB2
A
301 306Right-handed alpha
Helix 12
AB3
A
308 317Right-handed alpha
Helix 13
AB4
A
323 327Right-handed 310
Helix 14
AB5
A
329 333Right-handed 310
Helix 15
AB6
B
29 41Right-handed alpha
Helix 16
AB7
B
58 69Right-handed alpha
Helix 17
AB8
B
87 102Right-handed alpha
Helix 18
AB9
B
131 139Right-handed alpha
Helix 19
AC1
B
143 166Right-handed alpha
Helix 20
AC2
B
193 207Right-handed alpha
Helix 21
AC3
B
233 238Right-handed 310
Helix 22
AC4
B
240 244Right-handed 310
Helix 23
AC5
B
257 269Right-handed alpha
Helix 24
AC6
B
283 290Right-handed alpha
Helix 25
AC7
B
301 306Right-handed alpha
Helix 26
AC8
B
308 317Right-handed alpha
Helix 27
AC9
B
323 327Right-handed 310
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There are 2 sheets in PDB entry 6Q75. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
321 322first strand
Strand 2
A
46 51parallel
Strand 3
A
293 299parallel
Strand 4
A
273 278parallel
Strand 5
A
246 251parallel
Strand 6
A
214 221parallel
Strand 7
A
170 173parallel
Strand 8
A
104 108parallel
Strand 9
A
74 78parallel
Strand 10
A
46 51parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
321 322first strand
Strand 2
B
46 51parallel
Strand 3
B
293 299parallel
Strand 4
B
273 278parallel
Strand 5
B
246 251parallel
Strand 6
B
214 221parallel
Strand 7
B
170 173parallel
Strand 8
B
104 108parallel
Strand 9
B
74 78parallel
Strand 10
B
46 51parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il