Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q7W entry

There is 1 chain in PDB entry 6Q7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 93ARG 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6Q7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 119Right-handed alpha
Helix 2
AA2
A
128 137Right-handed alpha
Helix 3
AA3
A
138 142Right-handed 310
Helix 4
AA4
A
182 188Right-handed alpha
Helix 5
AA5
A
189 192Right-handed 310
Helix 6
AA6
A
220 230Right-handed alpha
Helix 7
AA7
A
242 248Right-handed alpha
Helix 8
AA8
A
274 277Right-handed 310
Helix 9
AA9
A
278 297Right-handed alpha
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There are 2 sheets in PDB entry 6Q7W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
95 100parallel
Strand 3
A
145 148parallel
Strand 4
A
263 272anti-parallel
Strand 5
A
158 172anti-parallel
Strand 6
A
234 238anti-parallel
Strand 7
A
194 195parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
95 100parallel
Strand 3
A
145 148parallel
Strand 4
A
263 272anti-parallel
Strand 5
A
158 172anti-parallel
Strand 6
A
252 253anti-parallel
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