Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q81


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q81 entry

There is 1 chain in PDB entry 6Q81 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 33ALA 1271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6Q81. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 89Right-handed alpha
Helix 2
AA2
A
97 153Right-handed alpha
Helix 3
AA3
A
156 161Right-handed alpha
Helix 4
AA4
A
166 182Right-handed alpha
Helix 5
AA5
A
183 207Right-handed alpha
Helix 6
AA6
A
208 256Right-handed alpha
Helix 7
AA7
A
256 264Right-handed alpha
Helix 8
AA8
A
265 319Right-handed alpha
Helix 9
AA9
A
325 343Right-handed alpha
Helix 10
AB1
A
343 366Right-handed alpha
Helix 11
AB2
A
428 436Right-handed alpha
Helix 12
AB3
A
458 465Right-handed alpha
Helix 13
AB4
A
479 486Right-handed alpha
Helix 14
AB5
A
492 503Right-handed alpha
Helix 15
AB6
A
507 512Right-handed alpha
Helix 16
AB7
A
514 518Right-handed 310
Helix 17
AB8
A
528 544Right-handed alpha
Helix 18
AB9
A
558 573Right-handed alpha
Helix 19
AC1
A
607 615Right-handed alpha
Helix 20
AC2
A
616 625Right-handed alpha
Helix 21
AC3
A
694 703Right-handed alpha
Helix 22
AC4
A
708 737Right-handed alpha
Helix 23
AC5
A
742 794Right-handed alpha
Helix 24
AC6
A
806 848Right-handed alpha
Helix 25
AC7
A
851 858Right-handed alpha
Helix 26
AC8
A
860 899Right-handed alpha
Helix 27
AC9
A
900 903Right-handed 310
Helix 28
AD1
A
906 957Right-handed alpha
Helix 29
AD2
A
957 963Right-handed alpha
Helix 30
AD3
A
970 1010Right-handed alpha
Helix 31
AD4
A
1071 1081Right-handed alpha
Helix 32
AD5
A
1101 1106Right-handed alpha
Helix 33
AD6
A
1122 1128Right-handed alpha
Helix 34
AD7
A
1137 1148Right-handed alpha
Helix 35
AD8
A
1150 1156Right-handed alpha
Helix 36
AD9
A
1159 1163Right-handed 310
Helix 37
AE1
A
1173 1188Right-handed alpha
Helix 38
AE2
A
1203 1218Right-handed alpha
Helix 39
AE3
A
1252 1259Right-handed alpha
Helix 40
AE4
A
1261 1271Right-handed alpha
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There are 6 sheets in PDB entry 6Q81. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 407first strand
Strand 2
A
388 395anti-parallel
Strand 3
A
410 413anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 407first strand
Strand 2
A
388 395anti-parallel
Strand 3
A
444 449anti-parallel
Strand 4
A
452 453anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
547 550parallel
Strand 3
A
577 581parallel
Strand 4
A
418 422parallel
Strand 5
A
593 597parallel
Strand 6
A
602 606anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1049 1056first strand
Strand 2
A
1031 1038anti-parallel
Strand 3
A
1087 1091anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1061 1063first strand
Strand 2
A
1222 1225parallel
Strand 3
A
1192 1195parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1239 1243first strand
Strand 2
A
1246 1251anti-parallel
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