Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q94

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Q94 entry

There are 4 chains in PDB entry 6Q94 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ARG 23	ALA 372
A	ARG 23	ALA 372
C	ARG 23	ALA 372
D	ARG 23	ASN 242

There are121 helices in PDB entry 6Q94. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	33	46	Right-handed alpha
Helix 2	AA2	B	65	69	Right-handed 310
Helix 3	AA3	B	89	101	Right-handed alpha
Helix 4	AA4	B	113	119	Right-handed alpha
Helix 5	AA5	B	120	129	Right-handed alpha
Helix 6	AA6	B	129	142	Right-handed alpha
Helix 7	AA7	B	157	159	Right-handed 310
Helix 8	AA8	B	177	198	Right-handed alpha
Helix 9	AA9	B	218	232	Right-handed alpha
Helix 10	AB1	B	252	265	Right-handed alpha
Helix 11	AB2	B	281	291	Right-handed alpha
Helix 12	AB3	B	301	304	Right-handed 310
Helix 13	AB4	B	321	324	Right-handed 310
Helix 14	AB5	B	336	344	Right-handed alpha
Helix 15	AB6	B	350	369	Right-handed alpha
Helix 16	AB7	A	33	46	Right-handed alpha
Helix 17	AB8	A	65	69	Right-handed 310
Helix 18	AB9	A	89	101	Right-handed alpha
Helix 19	AC1	A	115	120	Right-handed alpha
Helix 20	AC2	A	120	129	Right-handed alpha
Helix 21	AC3	A	129	142	Right-handed alpha
Helix 22	AC4	A	157	160	Right-handed 310
Helix 23	AC5	A	177	198	Right-handed alpha
Helix 24	AC6	A	218	232	Right-handed alpha
Helix 25	AC7	A	252	265	Right-handed alpha
Helix 26	AC8	A	281	291	Right-handed alpha
Helix 27	AC9	A	301	304	Right-handed 310
Helix 28	AD1	A	321	324	Right-handed 310
Helix 29	AD2	A	336	344	Right-handed alpha
Helix 30	AD3	A	350	369	Right-handed alpha
Helix 31	AD4	C	33	46	Right-handed alpha
Helix 32	AD5	C	65	69	Right-handed 310
Helix 33	AD6	C	89	101	Right-handed alpha
Helix 34	AD7	C	113	118	Right-handed alpha
Helix 35	AD8	C	120	129	Right-handed alpha
Helix 36	AD9	C	129	142	Right-handed alpha
Helix 37	AE1	C	157	159	Right-handed 310
Helix 38	AE2	C	177	198	Right-handed alpha
Helix 39	AE3	C	218	232	Right-handed alpha
Helix 40	AE4	C	252	265	Right-handed alpha
Helix 41	AE5	C	281	291	Right-handed alpha
Helix 42	AE6	C	301	304	Right-handed 310
Helix 43	AE7	C	321	324	Right-handed 310
Helix 44	AE8	C	336	344	Right-handed alpha
Helix 45	AE9	C	350	369	Right-handed alpha
Helix 46	AF1	D	33	46	Right-handed alpha
Helix 47	AF2	D	65	69	Right-handed 310
Helix 48	AF3	D	89	101	Right-handed alpha
Helix 49	AF4	D	115	119	Right-handed 310
Helix 50	AF5	D	120	129	Right-handed alpha
Helix 51	AF6	D	129	142	Right-handed alpha
Helix 52	AF7	D	157	159	Right-handed 310
Helix 53	AF8	D	177	198	Right-handed alpha
Helix 54	AF9	D	218	232	Right-handed alpha
Helix 55	AG1	D	252	265	Right-handed alpha
Helix 56	AG2	D	281	291	Right-handed alpha
Helix 57	AG3	D	301	304	Right-handed 310
Helix 58	AG4	D	321	324	Right-handed 310
Helix 59	AG5	D	336	344	Right-handed alpha
Helix 60	AG6	D	350	369	Right-handed alpha
Helix 61	AG7	E	33	46	Right-handed alpha
Helix 62	AG8	E	65	71	Right-handed alpha
Helix 63	AG9	E	89	101	Right-handed alpha
Helix 64	AH1	E	113	120	Right-handed alpha
Helix 65	AH2	E	120	129	Right-handed alpha
Helix 66	AH3	E	129	142	Right-handed alpha
Helix 67	AH4	E	143	147	Right-handed 310
Helix 68	AH5	E	157	160	Right-handed 310
Helix 69	AH6	E	177	198	Right-handed alpha
Helix 70	AH7	E	218	232	Right-handed alpha
Helix 71	AH8	E	252	265	Right-handed alpha
Helix 72	AH9	E	281	291	Right-handed alpha
Helix 73	AI1	E	301	304	Right-handed 310
Helix 74	AI2	E	321	324	Right-handed 310
Helix 75	AI3	E	336	344	Right-handed alpha
Helix 76	AI4	E	350	369	Right-handed alpha
Helix 77	AI5	F	33	46	Right-handed alpha
Helix 78	AI6	F	65	71	Right-handed alpha
Helix 79	AI7	F	89	101	Right-handed alpha
Helix 80	AI8	F	113	118	Right-handed alpha
Helix 81	AI9	F	120	129	Right-handed alpha
Helix 82	AJ1	F	129	142	Right-handed alpha
Helix 83	AJ2	F	157	160	Right-handed 310
Helix 84	AJ3	F	177	198	Right-handed alpha
Helix 85	AJ4	F	218	232	Right-handed alpha
Helix 86	AJ5	F	252	265	Right-handed alpha
Helix 87	AJ6	F	281	291	Right-handed alpha
Helix 88	AJ7	F	301	305	Right-handed 310
Helix 89	AJ8	F	321	324	Right-handed 310
Helix 90	AJ9	F	336	344	Right-handed alpha
Helix 91	AK1	F	350	369	Right-handed alpha
Helix 92	AK2	G	33	46	Right-handed alpha
Helix 93	AK3	G	65	69	Right-handed 310
Helix 94	AK4	G	89	101	Right-handed alpha
Helix 95	AK5	G	113	120	Right-handed alpha
Helix 96	AK6	G	120	129	Right-handed alpha
Helix 97	AK7	G	129	142	Right-handed alpha
Helix 98	AK8	G	157	159	Right-handed 310
Helix 99	AK9	G	177	198	Right-handed alpha
Helix 100	AL1	G	218	232	Right-handed alpha
Helix 101	AL2	G	252	265	Right-handed alpha
Helix 102	AL3	G	281	291	Right-handed alpha
Helix 103	AL4	G	301	304	Right-handed 310
Helix 104	AL5	G	321	324	Right-handed 310
Helix 105	AL6	G	336	344	Right-handed alpha
Helix 106	AL7	G	350	369	Right-handed alpha
Helix 107	AL8	H	33	46	Right-handed alpha
Helix 108	AL9	H	65	69	Right-handed 310
Helix 109	AM1	H	89	101	Right-handed alpha
Helix 110	AM2	H	113	120	Right-handed alpha
Helix 111	AM3	H	120	129	Right-handed alpha
Helix 112	AM4	H	129	142	Right-handed alpha
Helix 113	AM5	H	157	159	Right-handed 310
Helix 114	AM6	H	177	198	Right-handed alpha
Helix 115	AM7	H	218	232	Right-handed alpha
Helix 116	AM8	H	252	265	Right-handed alpha
Helix 117	AM9	H	281	291	Right-handed alpha
Helix 118	AN1	H	301	305	Right-handed 310
Helix 119	AN2	H	321	324	Right-handed 310
Helix 120	AN3	H	336	344	Right-handed alpha
Helix 121	AN4	H	350	368	Right-handed alpha

There are 32 sheets in PDB entry 6Q94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	84	first strand
Strand 2	B	49	54	parallel
Strand 3	B	25	29	parallel
Strand 4	B	104	107	parallel
Strand 5	B	149	155	parallel
Strand 6	B	200	206	parallel
Strand 7	B	271	273	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	210	first strand
Strand 2	B	250	251	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	240	first strand
Strand 2	B	315	319	parallel
Strand 3	B	306	309	anti-parallel
Strand 4	B	296	299	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	247	first strand
Strand 2	B	279	280	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	84	first strand
Strand 2	A	49	54	parallel
Strand 3	A	25	29	parallel
Strand 4	A	104	107	parallel
Strand 5	A	149	155	parallel
Strand 6	A	200	206	parallel
Strand 7	A	271	273	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	210	first strand
Strand 2	A	250	251	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	240	first strand
Strand 2	A	315	319	parallel
Strand 3	A	306	309	anti-parallel
Strand 4	A	296	299	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	248	first strand
Strand 2	A	278	280	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	84	first strand
Strand 2	C	49	54	parallel
Strand 3	C	25	29	parallel
Strand 4	C	104	107	parallel
Strand 5	C	149	155	parallel
Strand 6	C	200	206	parallel
Strand 7	C	271	273	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	210	first strand
Strand 2	C	250	251	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	240	first strand
Strand 2	C	315	319	parallel
Strand 3	C	306	309	anti-parallel
Strand 4	C	296	299	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	248	first strand
Strand 2	C	278	280	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	84	first strand
Strand 2	D	49	54	parallel
Strand 3	D	25	29	parallel
Strand 4	D	104	107	parallel
Strand 5	D	149	155	parallel
Strand 6	D	200	206	parallel
Strand 7	D	271	273	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	210	first strand
Strand 2	D	250	251	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	240	first strand
Strand 2	D	315	319	parallel
Strand 3	D	306	309	anti-parallel
Strand 4	D	296	299	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	246	247	first strand
Strand 2	D	279	280	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	84	first strand
Strand 2	E	49	54	parallel
Strand 3	E	25	29	parallel
Strand 4	E	104	107	parallel
Strand 5	E	149	155	parallel
Strand 6	E	200	206	parallel
Strand 7	E	271	273	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	209	210	first strand
Strand 2	E	250	251	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	238	240	first strand
Strand 2	E	315	319	parallel
Strand 3	E	306	309	anti-parallel
Strand 4	E	296	299	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	246	248	first strand
Strand 2	E	278	280	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	80	84	first strand
Strand 2	F	49	54	parallel
Strand 3	F	25	29	parallel
Strand 4	F	104	107	parallel
Strand 5	F	149	155	parallel
Strand 6	F	200	206	parallel
Strand 7	F	271	273	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	210	first strand
Strand 2	F	250	251	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	238	240	first strand
Strand 2	F	315	319	parallel
Strand 3	F	306	309	anti-parallel
Strand 4	F	296	299	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	246	247	first strand
Strand 2	F	279	280	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	80	84	first strand
Strand 2	G	49	54	parallel
Strand 3	G	25	29	parallel
Strand 4	G	104	107	parallel
Strand 5	G	149	155	parallel
Strand 6	G	200	206	parallel
Strand 7	G	271	273	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	209	210	first strand
Strand 2	G	250	251	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	238	240	first strand
Strand 2	G	315	319	parallel
Strand 3	G	306	309	anti-parallel
Strand 4	G	296	299	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	246	248	first strand
Strand 2	G	278	280	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	80	84	first strand
Strand 2	H	49	54	parallel
Strand 3	H	25	29	parallel
Strand 4	H	104	107	parallel
Strand 5	H	149	155	parallel
Strand 6	H	200	206	parallel
Strand 7	H	271	273	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	209	210	first strand
Strand 2	H	250	251	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	238	240	first strand
Strand 2	H	315	319	parallel
Strand 3	H	306	309	anti-parallel
Strand 4	H	296	299	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	246	248	first strand
Strand 2	H	278	280	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Q94

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q94