Analysis of interatomic Contacts of Structural Units in PDB entry:
6Q9Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Q9Z entry

There are 2 chains in PDB entry 6Q9Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 29ALA 754
B
 HIS 29GLU 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6Q9Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 35Right-handed 310
Helix 2
AA2
A
55 59Right-handed 310
Helix 3
AA3
A
94 112Right-handed alpha
Helix 4
AA4
A
127 132Right-handed alpha
Helix 5
AA5
A
179 183Right-handed 310
Helix 6
AA6
A
208 224Right-handed alpha
Helix 7
AA7
A
240 248Right-handed alpha
Helix 8
AA8
A
295 299Right-handed 310
Helix 9
AA9
A
310 312Right-handed 310
Helix 10
AB1
A
324 330Right-handed alpha
Helix 11
AB2
A
330 342Right-handed alpha
Helix 12
AB3
A
359 364Right-handed alpha
Helix 13
AB4
A
384 388Right-handed 310
Helix 14
AB5
A
396 400Right-handed 310
Helix 15
AB6
A
403 411Right-handed alpha
Helix 16
AB7
A
434 438Right-handed 310
Helix 17
AB8
A
472 490Right-handed alpha
Helix 18
AB9
A
506 511Right-handed 310
Helix 19
AC1
A
585 598Right-handed alpha
Helix 20
AC2
A
630 632Right-handed 310
Helix 21
AC3
A
633 638Right-handed alpha
Helix 22
AC4
A
662 666Right-handed 310
Helix 23
AC5
A
689 695Right-handed alpha
Helix 24
AC6
A
695 706Right-handed alpha
Helix 25
AC7
A
726 731Right-handed alpha
Helix 26
AC8
A
737 742Right-handed 310
Helix 27
AC9
A
744 753Right-handed alpha
Helix 28
AD1
B
55 59Right-handed 310
Helix 29
AD2
B
94 112Right-handed alpha
Helix 30
AD3
B
127 132Right-handed alpha
Helix 31
AD4
B
179 183Right-handed 310
Helix 32
AD5
B
206 224Right-handed alpha
Helix 33
AD6
B
240 248Right-handed alpha
Helix 34
AD7
B
295 299Right-handed 310
Helix 35
AD8
B
310 312Right-handed 310
Helix 36
AD9
B
324 330Right-handed alpha
Helix 37
AE1
B
330 342Right-handed alpha
Helix 38
AE2
B
359 364Right-handed alpha
Helix 39
AE3
B
384 388Right-handed 310
Helix 40
AE4
B
396 400Right-handed 310
Helix 41
AE5
B
403 411Right-handed alpha
Helix 42
AE6
B
434 438Right-handed 310
Helix 43
AE7
B
472 490Right-handed alpha
Helix 44
AE8
B
507 511Right-handed 310
Helix 45
AE9
B
584 598Right-handed alpha
Helix 46
AF1
B
611 616Right-handed alpha
Helix 47
AF2
B
617 619Right-handed 310
Helix 48
AF3
B
630 632Right-handed 310
Helix 49
AF4
B
633 638Right-handed alpha
Helix 50
AF5
B
647 651Right-handed 310
Helix 51
AF6
B
662 666Right-handed 310
Helix 52
AF7
B
689 695Right-handed alpha
Helix 53
AF8
B
695 707Right-handed alpha
Helix 54
AF9
B
726 731Right-handed alpha
Helix 55
AG1
B
737 742Right-handed 310
Helix 56
AG2
B
744 753Right-handed alpha
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There are 8 sheets in PDB entry 6Q9Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
40 46anti-parallel
Strand 3
A
67 76anti-parallel
Strand 4
A
80 89anti-parallel
Strand 5
A
117 122parallel
Strand 6
A
349 354anti-parallel
Strand 7
A
314 319parallel
Strand 8
A
304 309anti-parallel
Strand 9
A
272 276anti-parallel
Strand 10
A
285 289anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
138 141parallel
Strand 3
A
172 175parallel
Strand 4
A
161 165anti-parallel
Strand 5
A
188 192anti-parallel
Strand 6
A
196 201anti-parallel
Strand 7
A
230 235parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
420 426anti-parallel
Strand 3
A
446 454anti-parallel
Strand 4
A
459 467anti-parallel
Strand 5
A
495 500parallel
Strand 6
A
717 721anti-parallel
Strand 7
A
680 684parallel
Strand 8
A
671 675anti-parallel
Strand 9
A
641 648anti-parallel
Strand 10
A
651 657anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 442first strand
Strand 2
A
517 520parallel
Strand 3
A
549 554parallel
Strand 4
A
538 543anti-parallel
Strand 5
A
566 568anti-parallel
Strand 6
A
577 579anti-parallel
Strand 7
A
604 606parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
40 46anti-parallel
Strand 3
B
67 75anti-parallel
Strand 4
B
81 89anti-parallel
Strand 5
B
116 122parallel
Strand 6
B
349 354anti-parallel
Strand 7
B
314 319parallel
Strand 8
B
304 309anti-parallel
Strand 9
B
272 277anti-parallel
Strand 10
B
284 289anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
138 141parallel
Strand 3
B
172 176parallel
Strand 4
B
161 165anti-parallel
Strand 5
B
188 192anti-parallel
Strand 6
B
196 201anti-parallel
Strand 7
B
230 235parallel
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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 432first strand
Strand 2
B
420 426anti-parallel
Strand 3
B
446 454anti-parallel
Strand 4
B
459 467anti-parallel
Strand 5
B
495 500parallel
Strand 6
B
717 721anti-parallel
Strand 7
B
680 684parallel
Strand 8
B
671 675anti-parallel
Strand 9
B
641 646anti-parallel
Strand 10
B
653 657anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
440 442first strand
Strand 2
B
517 520parallel
Strand 3
B
549 554parallel
Strand 4
B
537 543anti-parallel
Strand 5
B
566 570anti-parallel
Strand 6
B
575 579anti-parallel
Strand 7
B
604 606parallel
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