Analysis of interatomic Contacts of Structural Units in PDB entry:
6QB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QB7 entry

There are 5 chains in PDB entry 6QB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 160ARG 282
B
 ASP 160ARG 282
C
 ARG 161ARG 282
D
 ARG 161ARG 282
E
 ARG 161ARG 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6QB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
198 206Right-handed alpha
Helix 2
AA2
A
232 243Right-handed alpha
Helix 3
AA3
B
198 206Right-handed alpha
Helix 4
AA4
B
232 243Right-handed alpha
Helix 5
AA5
C
198 206Right-handed alpha
Helix 6
AA6
C
232 243Right-handed alpha
Helix 7
AA7
D
198 206Right-handed alpha
Helix 8
AA8
D
232 243Right-handed alpha
Helix 9
AA9
E
198 206Right-handed alpha
Helix 10
AB1
E
232 243Right-handed alpha
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There are 5 sheets in PDB entry 6QB7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
222 228anti-parallel
Strand 3
A
193 197anti-parallel
Strand 4
A
164 171anti-parallel
Strand 5
A
266 278anti-parallel
Strand 6
A
246 258anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
222 228anti-parallel
Strand 3
B
193 197anti-parallel
Strand 4
B
164 171anti-parallel
Strand 5
B
266 278anti-parallel
Strand 6
B
246 258anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 210first strand
Strand 2
C
222 228anti-parallel
Strand 3
C
193 197anti-parallel
Strand 4
C
164 172anti-parallel
Strand 5
C
266 278anti-parallel
Strand 6
C
246 258anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
209 210first strand
Strand 2
D
222 228anti-parallel
Strand 3
D
193 197anti-parallel
Strand 4
D
164 171anti-parallel
Strand 5
D
266 278anti-parallel
Strand 6
D
246 258anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
209 210first strand
Strand 2
E
222 228anti-parallel
Strand 3
E
193 197anti-parallel
Strand 4
E
164 171anti-parallel
Strand 5
E
266 278anti-parallel
Strand 6
E
246 258anti-parallel
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