Analysis of interatomic Contacts of Structural Units in PDB entry:
6QDK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QDK entry

There is 1 chain in PDB entry 6QDK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7UNK 934
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 6QDK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 21Right-handed alpha
Helix 2
AA2
A
23 37Right-handed alpha
Helix 3
AA3
A
45 60Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
80 94Right-handed alpha
Helix 6
AA6
A
97 111Right-handed alpha
Helix 7
AA7
A
114 130Right-handed alpha
Helix 8
AA8
A
130 150Right-handed alpha
Helix 9
AA9
A
157 173Right-handed alpha
Helix 10
AB1
A
174 183Right-handed alpha
Helix 11
AB2
A
186 196Right-handed alpha
Helix 12
AB3
A
201 216Right-handed alpha
Helix 13
AB4
A
220 228Right-handed alpha
Helix 14
AB5
A
232 242Right-handed alpha
Helix 15
AB6
A
249 269Right-handed alpha
Helix 16
AB7
A
279 286Right-handed alpha
Helix 17
AB8
A
286 303Right-handed alpha
Helix 18
AB9
A
307 322Right-handed alpha
Helix 19
AC1
A
323 327Right-handed 310
Helix 20
AC2
A
332 340Right-handed alpha
Helix 21
AC3
A
341 351Right-handed alpha
Helix 22
AC4
A
364 378Right-handed alpha
Helix 23
AC5
A
382 401Right-handed alpha
Helix 24
AC6
A
407 427Right-handed alpha
Helix 25
AC7
A
432 436Right-handed 310
Helix 26
AC8
A
441 450Right-handed alpha
Helix 27
AC9
A
453 466Right-handed alpha
Helix 28
AD1
A
477 489Right-handed alpha
Helix 29
AD2
A
493 506Right-handed alpha
Helix 30
AD3
A
525 538Right-handed alpha
Helix 31
AD4
A
539 542Right-handed 310
Helix 32
AD5
A
543 558Right-handed alpha
Helix 33
AD6
A
560 570Right-handed alpha
Helix 34
AD7
A
572 585Right-handed alpha
Helix 35
AD8
A
588 600Right-handed alpha
Helix 36
AD9
A
631 645Right-handed alpha
Helix 37
AE1
A
646 652Right-handed alpha
Helix 38
AE2
A
659 674Right-handed alpha
Helix 39
AE3
A
676 687Right-handed alpha
Helix 40
AE4
A
687 699Right-handed alpha
Helix 41
AE5
A
700 716Right-handed alpha
Helix 42
AE6
A
719 724Right-handed alpha
Helix 43
AE7
A
728 734Right-handed alpha
Helix 44
AE8
A
746 761Right-handed alpha
Helix 45
AE9
A
763 775Right-handed alpha
Helix 46
AF1
A
775 781Right-handed alpha
Helix 47
AF2
A
790 802Right-handed alpha
Helix 48
AF3
A
805 812Right-handed alpha
Helix 49
AF4
A
820 829Right-handed alpha
Helix 50
AF5
A
833 846Right-handed alpha
Helix 51
AF6
A
865 870Right-handed alpha
Helix 52
AF7
A
875 890Right-handed alpha
Helix 53
AF8
A
894 900Right-handed alpha
Helix 54
AF9
A
906 912Right-handed alpha
Helix 55
AG1
A
919 929Right-handed alpha
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There are no sheets in PDB entry 6QDK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il