Analysis of interatomic Contacts of Structural Units in PDB entry:
6QEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QEH entry

There is 1 chain in PDB entry 6QEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 111GLY 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6QEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
119 124Right-handed alpha
Helix 2
AA2
A
146 151Right-handed 310
Helix 3
AA3
A
152 162Right-handed alpha
Helix 4
AA4
A
162 187Right-handed alpha
Helix 5
AA5
A
192 209Right-handed alpha
Helix 6
AA6
A
270 272Right-handed 310
Helix 7
AA7
A
273 291Right-handed alpha
Helix 8
AA8
A
296 309Right-handed alpha
Helix 9
AA9
A
396 410Right-handed alpha
Helix 10
AB1
A
417 423Right-handed alpha
Helix 11
AB2
A
428 438Right-handed alpha
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There are 6 sheets in PDB entry 6QEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
469 471anti-parallel
Strand 3
A
455 464anti-parallel
Strand 4
A
360 368anti-parallel
Strand 5
A
323 324anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 135first strand
Strand 2
A
469 471anti-parallel
Strand 3
A
455 464anti-parallel
Strand 4
A
360 368anti-parallel
Strand 5
A
330 332anti-parallel
Strand 6
A
343 344anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 225first strand
Strand 2
A
248 256anti-parallel
Strand 3
A
259 267anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
447 448anti-parallel
Strand 3
A
375 376anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 315first strand
Strand 2
A
318 321anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 416first strand
Strand 2
A
382 385anti-parallel
Strand 3
A
441 444anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il