Analysis of interatomic Contacts of Structural Units in PDB entry:
6QER


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QER entry

There are 4 chains in PDB entry 6QER (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 300
B
 MET 1GLY 300
C
 MET 1HIS 305
D
 LEU 3GLY 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 6QER. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
21 27Right-handed alpha
Helix 3
AA3
A
33 42Right-handed alpha
Helix 4
AA4
A
48 60Right-handed alpha
Helix 5
AA5
A
62 68Right-handed alpha
Helix 6
AA6
A
75 87Right-handed alpha
Helix 7
AA7
A
99 112Right-handed alpha
Helix 8
AA8
A
113 115Right-handed 310
Helix 9
AA9
A
116 129Right-handed alpha
Helix 10
AB1
A
130 135Right-handed 310
Helix 11
AB2
A
138 153Right-handed alpha
Helix 12
AB3
A
159 173Right-handed alpha
Helix 13
AB4
A
180 194Right-handed alpha
Helix 14
AB5
A
199 221Right-handed alpha
Helix 15
AB6
A
225 241Right-handed alpha
Helix 16
AB7
A
242 244Right-handed 310
Helix 17
AB8
A
245 260Right-handed alpha
Helix 18
AB9
A
263 280Right-handed alpha
Helix 19
AC1
A
283 297Right-handed alpha
Helix 20
AC2
B
2 19Right-handed alpha
Helix 21
AC3
B
21 27Right-handed alpha
Helix 22
AC4
B
33 42Right-handed alpha
Helix 23
AC5
B
48 60Right-handed alpha
Helix 24
AC6
B
62 68Right-handed alpha
Helix 25
AC7
B
75 87Right-handed alpha
Helix 26
AC8
B
93 112Right-handed alpha
Helix 27
AC9
B
113 115Right-handed 310
Helix 28
AD1
B
116 131Right-handed alpha
Helix 29
AD2
B
138 153Right-handed alpha
Helix 30
AD3
B
159 174Right-handed alpha
Helix 31
AD4
B
180 193Right-handed alpha
Helix 32
AD5
B
199 221Right-handed alpha
Helix 33
AD6
B
225 241Right-handed alpha
Helix 34
AD7
B
242 244Right-handed 310
Helix 35
AD8
B
245 260Right-handed alpha
Helix 36
AD9
B
263 280Right-handed alpha
Helix 37
AE1
B
283 297Right-handed alpha
Helix 38
AE2
C
2 18Right-handed alpha
Helix 39
AE3
C
21 27Right-handed alpha
Helix 40
AE4
C
33 42Right-handed alpha
Helix 41
AE5
C
48 60Right-handed alpha
Helix 42
AE6
C
62 68Right-handed alpha
Helix 43
AE7
C
75 87Right-handed alpha
Helix 44
AE8
C
93 112Right-handed alpha
Helix 45
AE9
C
113 115Right-handed 310
Helix 46
AF1
C
116 131Right-handed alpha
Helix 47
AF2
C
134 137Right-handed 310
Helix 48
AF3
C
138 153Right-handed alpha
Helix 49
AF4
C
159 173Right-handed alpha
Helix 50
AF5
C
180 193Right-handed alpha
Helix 51
AF6
C
199 220Right-handed alpha
Helix 52
AF7
C
225 241Right-handed alpha
Helix 53
AF8
C
242 244Right-handed 310
Helix 54
AF9
C
245 260Right-handed alpha
Helix 55
AG1
C
263 282Right-handed alpha
Helix 56
AG2
C
283 297Right-handed alpha
Helix 57
AG3
D
4 17Right-handed alpha
Helix 58
AG4
D
18 20Right-handed 310
Helix 59
AG5
D
21 27Right-handed alpha
Helix 60
AG6
D
33 42Right-handed alpha
Helix 61
AG7
D
48 60Right-handed alpha
Helix 62
AG8
D
62 68Right-handed alpha
Helix 63
AG9
D
75 87Right-handed alpha
Helix 64
AH1
D
93 112Right-handed alpha
Helix 65
AH2
D
113 115Right-handed 310
Helix 66
AH3
D
116 131Right-handed alpha
Helix 67
AH4
D
138 153Right-handed alpha
Helix 68
AH5
D
159 174Right-handed alpha
Helix 69
AH6
D
180 193Right-handed alpha
Helix 70
AH7
D
199 221Right-handed alpha
Helix 71
AH8
D
225 241Right-handed alpha
Helix 72
AH9
D
242 244Right-handed 310
Helix 73
AI1
D
245 259Right-handed alpha
Helix 74
AI2
D
263 282Right-handed alpha
Helix 75
AI3
D
286 297Right-handed alpha
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There are no sheets in PDB entry 6QER
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