Analysis of interatomic Contacts of Structural Units in PDB entry:
6QHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QHG entry

There are 2 chains in PDB entry 6QHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1704LYS 1822
B
 GLY 1706LYS 1822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6QHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1767 1770Right-handed 310
Helix 2
AA2
A
1771 1783Right-handed alpha
Helix 3
AA3
B
1767 1770Right-handed 310
Helix 4
AA4
B
1771 1783Right-handed alpha
Helix 5
AA5
B
1790 1794Right-handed 310
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There are 4 sheets in PDB entry 6QHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1710 1715first strand
Strand 2
A
1725 1729anti-parallel
Strand 3
A
1718 1722anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1710 1715first strand
Strand 2
A
1732 1737anti-parallel
Strand 3
A
1741 1749anti-parallel
Strand 4
A
1756 1762anti-parallel
Strand 5
A
1816 1820parallel
Strand 6
A
1800 1803anti-parallel
Strand 7
A
1806 1808anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1709 1715first strand
Strand 2
B
1725 1729anti-parallel
Strand 3
B
1718 1722anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1709 1715first strand
Strand 2
B
1732 1739anti-parallel
Strand 3
B
1741 1749anti-parallel
Strand 4
B
1756 1762anti-parallel
Strand 5
B
1816 1820parallel
Strand 6
B
1800 1803anti-parallel
Strand 7
B
1806 1808anti-parallel
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