Analysis of interatomic Contacts of Structural Units in PDB entry:
6QIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QIM entry

There are 2 chains in PDB entry 6QIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 32ALA 274
B
 LEU 32ILE 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6QIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 66Right-handed alpha
Helix 2
AA2
A
78 98Right-handed alpha
Helix 3
AA3
A
107 117Right-handed alpha
Helix 4
AA4
A
122 147Right-handed alpha
Helix 5
AA5
A
148 154Right-handed alpha
Helix 6
AA6
A
166 188Right-handed alpha
Helix 7
AA7
A
204 220Right-handed alpha
Helix 8
AA8
A
228 240Right-handed alpha
Helix 9
AA9
A
241 247Right-handed alpha
Helix 10
AB1
A
249 268Right-handed alpha
Helix 11
AB2
B
33 67Right-handed alpha
Helix 12
AB3
B
79 98Right-handed alpha
Helix 13
AB4
B
107 117Right-handed alpha
Helix 14
AB5
B
121 154Right-handed alpha
Helix 15
AB6
B
166 188Right-handed alpha
Helix 16
AB7
B
205 224Right-handed alpha
Helix 17
AB8
B
228 240Right-handed alpha
Helix 18
AB9
B
241 246Right-handed alpha
Helix 19
AC1
B
249 268Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6QIM.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 194first strand
Strand 2
A
201 203anti-parallel
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