Analysis of interatomic Contacts of Structural Units in PDB entry:
6QIN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QIN entry

There are 2 chains in PDB entry 6QIN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 15PRO 332
B
 MET 15PRO 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6QIN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
46 69Right-handed alpha
Helix 3
AA3
A
114 129Right-handed alpha
Helix 4
AA4
A
146 160Right-handed alpha
Helix 5
AA5
A
164 166Right-handed 310
Helix 6
AA6
A
174 190Right-handed alpha
Helix 7
AA7
A
211 216Right-handed alpha
Helix 8
AA8
A
236 240Right-handed 310
Helix 9
AA9
A
250 253Right-handed 310
Helix 10
AB1
A
254 260Right-handed alpha
Helix 11
AB2
A
274 288Right-handed alpha
Helix 12
AB3
A
303 307Right-handed 310
Helix 13
AB4
A
310 328Right-handed alpha
Helix 14
AB5
B
25 38Right-handed alpha
Helix 15
AB6
B
46 69Right-handed alpha
Helix 16
AB7
B
93 97Right-handed 310
Helix 17
AB8
B
114 129Right-handed alpha
Helix 18
AB9
B
146 160Right-handed alpha
Helix 19
AC1
B
164 166Right-handed 310
Helix 20
AC2
B
174 191Right-handed alpha
Helix 21
AC3
B
211 216Right-handed alpha
Helix 22
AC4
B
236 240Right-handed 310
Helix 23
AC5
B
250 253Right-handed 310
Helix 24
AC6
B
254 260Right-handed alpha
Helix 25
AC7
B
274 288Right-handed alpha
Helix 26
AC8
B
303 307Right-handed 310
Helix 27
AC9
B
310 328Right-handed alpha
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There are 2 sheets in PDB entry 6QIN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 78first strand
Strand 2
A
81 88anti-parallel
Strand 3
A
132 135anti-parallel
Strand 4
A
100 104parallel
Strand 5
A
168 173parallel
Strand 6
A
197 201parallel
Strand 7
A
264 269parallel
Strand 8
A
292 297parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 78first strand
Strand 2
B
81 88anti-parallel
Strand 3
B
132 135anti-parallel
Strand 4
B
100 104parallel
Strand 5
B
168 173parallel
Strand 6
B
197 201parallel
Strand 7
B
264 269parallel
Strand 8
B
292 297parallel
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