Analysis of interatomic Contacts of Structural Units in PDB entry:
6QK0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QK0 entry

There are 2 chains in PDB entry 6QK0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 8LYS 287
B
 HIS 4THR 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6QK0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
34 38Right-handed 310
Helix 3
AA3
A
40 49Right-handed alpha
Helix 4
AA4
A
58 76Right-handed alpha
Helix 5
AA5
A
76 86Right-handed alpha
Helix 6
AA6
A
88 116Right-handed alpha
Helix 7
AA7
A
122 127Right-handed 310
Helix 8
AA8
A
128 136Right-handed alpha
Helix 9
AA9
A
137 146Right-handed alpha
Helix 10
AB1
A
151 163Right-handed alpha
Helix 11
AB2
A
169 186Right-handed alpha
Helix 12
AB3
A
188 218Right-handed alpha
Helix 13
AB4
A
221 252Right-handed alpha
Helix 14
AB5
A
253 259Right-handed alpha
Helix 15
AB6
A
264 282Right-handed alpha
Helix 16
AB7
B
7 12Right-handed alpha
Helix 17
AB8
B
18 31Right-handed alpha
Helix 18
AB9
B
34 38Right-handed 310
Helix 19
AC1
B
40 49Right-handed alpha
Helix 20
AC2
B
51 66Right-handed alpha
Helix 21
AC3
B
76 86Right-handed alpha
Helix 22
AC4
B
88 116Right-handed alpha
Helix 23
AC5
B
122 127Right-handed 310
Helix 24
AC6
B
128 136Right-handed alpha
Helix 25
AC7
B
137 146Right-handed alpha
Helix 26
AC8
B
151 163Right-handed alpha
Helix 27
AC9
B
169 186Right-handed alpha
Helix 28
AD1
B
188 218Right-handed alpha
Helix 29
AD2
B
221 251Right-handed alpha
Helix 30
AD3
B
264 282Right-handed alpha
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There are no sheets in PDB entry 6QK0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il