Analysis of interatomic Contacts of Structural Units in PDB entry:
6QKX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QKX entry

There is 1 chain in PDB entry 6QKX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 13GLY 672
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6QKX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 19Right-handed 310
Helix 2
AA2
A
50 63Right-handed alpha
Helix 3
AA3
A
76 80Right-handed 310
Helix 4
AA4
A
90 92Right-handed 310
Helix 5
AA5
A
93 107Right-handed alpha
Helix 6
AA6
A
118 122Right-handed 310
Helix 7
AA7
A
123 128Right-handed 310
Helix 8
AA8
A
163 183Right-handed alpha
Helix 9
AA9
A
197 204Right-handed alpha
Helix 10
AB1
A
217 222Right-handed alpha
Helix 11
AB2
A
222 237Right-handed alpha
Helix 12
AB3
A
257 272Right-handed alpha
Helix 13
AB4
A
300 310Right-handed alpha
Helix 14
AB5
A
324 334Right-handed alpha
Helix 15
AB6
A
343 349Right-handed alpha
Helix 16
AB7
A
351 358Right-handed alpha
Helix 17
AB8
A
360 364Right-handed 310
Helix 18
AB9
A
374 380Right-handed alpha
Helix 19
AC1
A
397 401Right-handed 310
Helix 20
AC2
A
417 430Right-handed alpha
Helix 21
AC3
A
445 451Right-handed alpha
Helix 22
AC4
A
452 457Right-handed 310
Helix 23
AC5
A
458 473Right-handed alpha
Helix 24
AC6
A
484 492Right-handed alpha
Helix 25
AC7
A
519 525Right-handed alpha
Helix 26
AC8
A
540 553Right-handed alpha
Helix 27
AC9
A
571 585Right-handed alpha
Helix 28
AD1
A
630 636Right-handed alpha
Helix 29
AD2
A
648 652Right-handed 310
Helix 30
AD3
A
655 668Right-handed alpha
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There are 8 sheets in PDB entry 6QKX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
26 28anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
67 73parallel
Strand 3
A
110 115parallel
Strand 4
A
188 193parallel
Strand 5
A
242 249parallel
Strand 6
A
277 281parallel
Strand 7
A
316 318parallel
Strand 8
A
339 342parallel
Strand 9
A
32 34parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
137 139anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
160 161parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 478first strand
Strand 2
A
433 437parallel
Strand 3
A
410 414parallel
Strand 4
A
495 498parallel
Strand 5
A
643 646parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 504first strand
Strand 2
A
626 628anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 518first strand
Strand 2
A
619 622parallel
Strand 3
A
533 537parallel
Strand 4
A
556 561parallel
Strand 5
A
588 591parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 598first strand
Strand 2
A
602 607anti-parallel
Strand 3
A
610 616anti-parallel
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