Analysis of interatomic Contacts of Structural Units in PDB entry:
6QPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QPC entry

There are 2 chains in PDB entry 6QPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 94SER 861
B
 GLN 94SER 861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6QPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 107Right-handed alpha
Helix 2
AA2
A
131 142Right-handed alpha
Helix 3
AA3
A
205 214Right-handed alpha
Helix 4
AA4
A
265 273Right-handed alpha
Helix 5
AA5
A
275 279Right-handed 310
Helix 6
AA6
A
284 292Right-handed alpha
Helix 7
AA7
A
293 327Right-handed alpha
Helix 8
AA8
A
328 330Right-handed 310
Helix 9
AA9
A
331 339Right-handed alpha
Helix 10
AB1
A
360 363Right-handed 310
Helix 11
AB2
A
364 375Right-handed alpha
Helix 12
AB3
A
376 404Right-handed alpha
Helix 13
AB4
A
462 487Right-handed alpha
Helix 14
AB5
A
504 539Right-handed alpha
Helix 15
AB6
A
543 573Right-handed alpha
Helix 16
AB7
A
601 637Right-handed alpha
Helix 17
AB8
A
648 655Right-handed alpha
Helix 18
AB9
A
664 680Right-handed alpha
Helix 19
AC1
A
687 710Right-handed alpha
Helix 20
AC2
A
724 746Right-handed alpha
Helix 21
AC3
A
749 761Right-handed alpha
Helix 22
AC4
A
775 781Right-handed alpha
Helix 23
AC5
A
825 857Right-handed alpha
Helix 24
AC6
B
95 107Right-handed alpha
Helix 25
AC7
B
131 142Right-handed alpha
Helix 26
AC8
B
205 214Right-handed alpha
Helix 27
AC9
B
265 273Right-handed alpha
Helix 28
AD1
B
275 279Right-handed 310
Helix 29
AD2
B
284 292Right-handed alpha
Helix 30
AD3
B
293 327Right-handed alpha
Helix 31
AD4
B
328 330Right-handed 310
Helix 32
AD5
B
331 339Right-handed alpha
Helix 33
AD6
B
360 363Right-handed 310
Helix 34
AD7
B
364 375Right-handed alpha
Helix 35
AD8
B
376 404Right-handed alpha
Helix 36
AD9
B
462 487Right-handed alpha
Helix 37
AE1
B
504 539Right-handed alpha
Helix 38
AE2
B
543 573Right-handed alpha
Helix 39
AE3
B
601 637Right-handed alpha
Helix 40
AE4
B
648 655Right-handed alpha
Helix 41
AE5
B
664 680Right-handed alpha
Helix 42
AE6
B
687 710Right-handed alpha
Helix 43
AE7
B
724 746Right-handed alpha
Helix 44
AE8
B
749 761Right-handed alpha
Helix 45
AE9
B
775 781Right-handed alpha
Helix 46
AF1
B
825 857Right-handed alpha
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There are 2 sheets in PDB entry 6QPC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
782 783first strand
Strand 2
A
808 809anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
782 783first strand
Strand 2
B
808 809anti-parallel
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