Analysis of interatomic Contacts of Structural Units in PDB entry:
6QPI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QPI entry

There are 2 chains in PDB entry 6QPI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 295LYS 850
B
 LYS 295LYS 850
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 6QPI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
295 323Right-handed alpha
Helix 2
AA2
A
378 405Right-handed alpha
Helix 3
AA3
A
456 473Right-handed alpha
Helix 4
AA4
A
512 532Right-handed alpha
Helix 5
AA5
A
557 574Right-handed alpha
Helix 6
AA6
A
605 627Right-handed alpha
Helix 7
AA7
A
666 681Right-handed alpha
Helix 8
AA8
A
687 705Right-handed alpha
Helix 9
AA9
A
727 746Right-handed alpha
Helix 10
AB1
A
830 850Right-handed alpha
Helix 11
AB2
B
296 323Right-handed alpha
Helix 12
AB3
B
378 405Right-handed alpha
Helix 13
AB4
B
456 473Right-handed alpha
Helix 14
AB5
B
512 532Right-handed alpha
Helix 15
AB6
B
557 574Right-handed alpha
Helix 16
AB7
B
605 627Right-handed alpha
Helix 17
AB8
B
666 681Right-handed alpha
Helix 18
AB9
B
687 705Right-handed alpha
Helix 19
AC1
B
727 746Right-handed alpha
Helix 20
AC2
B
830 850Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6QPI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il