Analysis of interatomic Contacts of Structural Units in PDB entry:
6QQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QQ5 entry

There are 2 chains in PDB entry 6QQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 743
B
 MET 1LEU 743
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 6QQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 32Right-handed alpha
Helix 2
AA2
A
51 63Right-handed alpha
Helix 3
AA3
A
64 69Right-handed 310
Helix 4
AA4
A
82 101Right-handed alpha
Helix 5
AA5
A
107 111Right-handed 310
Helix 6
AA6
A
112 127Right-handed alpha
Helix 7
AA7
A
142 160Right-handed alpha
Helix 8
AA8
A
182 197Right-handed alpha
Helix 9
AA9
A
227 254Right-handed alpha
Helix 10
AB1
A
278 281Right-handed 310
Helix 11
AB2
A
282 304Right-handed alpha
Helix 12
AB3
A
304 309Right-handed alpha
Helix 13
AB4
A
323 351Right-handed alpha
Helix 14
AB5
A
362 390Right-handed alpha
Helix 15
AB6
A
412 439Right-handed alpha
Helix 16
AB7
A
445 459Right-handed alpha
Helix 17
AB8
A
462 466Right-handed 310
Helix 18
AB9
A
473 478Right-handed alpha
Helix 19
AC1
A
492 508Right-handed alpha
Helix 20
AC2
A
517 520Right-handed 310
Helix 21
AC3
A
521 526Right-handed alpha
Helix 22
AC4
A
534 539Right-handed 310
Helix 23
AC5
A
545 555Right-handed alpha
Helix 24
AC6
A
556 559Right-handed 310
Helix 25
AC7
A
560 565Right-handed alpha
Helix 26
AC8
A
580 584Right-handed 310
Helix 27
AC9
A
588 603Right-handed alpha
Helix 28
AD1
A
605 610Right-handed alpha
Helix 29
AD2
A
625 636Right-handed alpha
Helix 30
AD3
A
643 648Right-handed alpha
Helix 31
AD4
A
663 670Right-handed alpha
Helix 32
AD5
A
670 678Right-handed alpha
Helix 33
AD6
A
678 683Right-handed alpha
Helix 34
AD7
A
683 697Right-handed alpha
Helix 35
AD8
A
699 703Right-handed 310
Helix 36
AD9
A
720 742Right-handed alpha
Helix 37
AE1
B
6 18Right-handed alpha
Helix 38
AE2
B
25 31Right-handed alpha
Helix 39
AE3
B
51 63Right-handed alpha
Helix 40
AE4
B
64 69Right-handed 310
Helix 41
AE5
B
85 99Right-handed alpha
Helix 42
AE6
B
107 111Right-handed 310
Helix 43
AE7
B
112 117Right-handed alpha
Helix 44
AE8
B
119 127Right-handed alpha
Helix 45
AE9
B
142 160Right-handed alpha
Helix 46
AF1
B
184 199Right-handed alpha
Helix 47
AF2
B
226 254Right-handed alpha
Helix 48
AF3
B
278 283Right-handed 310
Helix 49
AF4
B
284 304Right-handed alpha
Helix 50
AF5
B
304 309Right-handed alpha
Helix 51
AF6
B
323 350Right-handed alpha
Helix 52
AF7
B
350 355Right-handed alpha
Helix 53
AF8
B
363 368Right-handed alpha
Helix 54
AF9
B
370 385Right-handed alpha
Helix 55
AG1
B
385 390Right-handed alpha
Helix 56
AG2
B
412 432Right-handed alpha
Helix 57
AG3
B
434 439Right-handed alpha
Helix 58
AG4
B
445 459Right-handed alpha
Helix 59
AG5
B
462 466Right-handed 310
Helix 60
AG6
B
473 478Right-handed alpha
Helix 61
AG7
B
492 508Right-handed alpha
Helix 62
AG8
B
517 521Right-handed 310
Helix 63
AG9
B
534 539Right-handed 310
Helix 64
AH1
B
547 555Right-handed alpha
Helix 65
AH2
B
556 559Right-handed 310
Helix 66
AH3
B
560 565Right-handed alpha
Helix 67
AH4
B
580 584Right-handed 310
Helix 68
AH5
B
588 603Right-handed alpha
Helix 69
AH6
B
605 610Right-handed alpha
Helix 70
AH7
B
625 636Right-handed alpha
Helix 71
AH8
B
663 668Right-handed alpha
Helix 72
AH9
B
671 676Right-handed alpha
Helix 73
AI1
B
678 683Right-handed alpha
Helix 74
AI2
B
685 695Right-handed alpha
Helix 75
AI3
B
699 703Right-handed 310
Helix 76
AI4
B
720 742Right-handed alpha
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There are 2 sheets in PDB entry 6QQ5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
47 50anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
47 50anti-parallel
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