Analysis of interatomic Contacts of Structural Units in PDB entry:
6QQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QQ6 entry

There are 2 chains in PDB entry 6QQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 743
B
 MET 1LEU 743
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 6QQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 32Right-handed alpha
Helix 2
AA2
A
51 64Right-handed alpha
Helix 3
AA3
A
65 69Right-handed 310
Helix 4
AA4
A
82 105Right-handed alpha
Helix 5
AA5
A
112 127Right-handed alpha
Helix 6
AA6
A
142 160Right-handed alpha
Helix 7
AA7
A
183 200Right-handed alpha
Helix 8
AA8
A
226 254Right-handed alpha
Helix 9
AA9
A
276 281Right-handed alpha
Helix 10
AB1
A
282 304Right-handed alpha
Helix 11
AB2
A
304 309Right-handed alpha
Helix 12
AB3
A
323 355Right-handed alpha
Helix 13
AB4
A
363 390Right-handed alpha
Helix 14
AB5
A
394 398Right-handed 310
Helix 15
AB6
A
412 435Right-handed alpha
Helix 16
AB7
A
436 438Right-handed 310
Helix 17
AB8
A
447 461Right-handed alpha
Helix 18
AB9
A
462 466Right-handed 310
Helix 19
AC1
A
475 479Right-handed 310
Helix 20
AC2
A
490 498Right-handed alpha
Helix 21
AC3
A
498 508Right-handed alpha
Helix 22
AC4
A
517 522Right-handed alpha
Helix 23
AC5
A
523 525Right-handed 310
Helix 24
AC6
A
526 531Right-handed alpha
Helix 25
AC7
A
532 538Right-handed 310
Helix 26
AC8
A
545 558Right-handed alpha
Helix 27
AC9
A
571 578Right-handed alpha
Helix 28
AD1
A
579 585Right-handed 310
Helix 29
AD2
A
586 602Right-handed alpha
Helix 30
AD3
A
605 610Right-handed alpha
Helix 31
AD4
A
616 620Right-handed 310
Helix 32
AD5
A
625 635Right-handed alpha
Helix 33
AD6
A
640 651Right-handed alpha
Helix 34
AD7
A
663 670Right-handed alpha
Helix 35
AD8
A
670 681Right-handed alpha
Helix 36
AD9
A
682 697Right-handed alpha
Helix 37
AE1
A
698 704Right-handed alpha
Helix 38
AE2
A
704 709Right-handed alpha
Helix 39
AE3
A
712 719Right-handed alpha
Helix 40
AE4
A
720 742Right-handed alpha
Helix 41
AE5
B
4 32Right-handed alpha
Helix 42
AE6
B
51 64Right-handed alpha
Helix 43
AE7
B
65 69Right-handed 310
Helix 44
AE8
B
82 105Right-handed alpha
Helix 45
AE9
B
112 127Right-handed alpha
Helix 46
AF1
B
142 160Right-handed alpha
Helix 47
AF2
B
183 200Right-handed alpha
Helix 48
AF3
B
226 254Right-handed alpha
Helix 49
AF4
B
276 281Right-handed alpha
Helix 50
AF5
B
282 304Right-handed alpha
Helix 51
AF6
B
304 309Right-handed alpha
Helix 52
AF7
B
323 355Right-handed alpha
Helix 53
AF8
B
363 390Right-handed alpha
Helix 54
AF9
B
394 398Right-handed 310
Helix 55
AG1
B
412 435Right-handed alpha
Helix 56
AG2
B
436 438Right-handed 310
Helix 57
AG3
B
447 461Right-handed alpha
Helix 58
AG4
B
462 466Right-handed 310
Helix 59
AG5
B
475 479Right-handed 310
Helix 60
AG6
B
493 498Right-handed alpha
Helix 61
AG7
B
498 508Right-handed alpha
Helix 62
AG8
B
517 522Right-handed alpha
Helix 63
AG9
B
526 531Right-handed alpha
Helix 64
AH1
B
532 538Right-handed 310
Helix 65
AH2
B
545 558Right-handed alpha
Helix 66
AH3
B
571 576Right-handed alpha
Helix 67
AH4
B
577 579Right-handed 310
Helix 68
AH5
B
580 585Right-handed 310
Helix 69
AH6
B
586 603Right-handed alpha
Helix 70
AH7
B
605 610Right-handed alpha
Helix 71
AH8
B
616 620Right-handed 310
Helix 72
AH9
B
625 635Right-handed alpha
Helix 73
AI1
B
643 651Right-handed alpha
Helix 74
AI2
B
663 681Right-handed alpha
Helix 75
AI3
B
682 697Right-handed alpha
Helix 76
AI4
B
698 704Right-handed alpha
Helix 77
AI5
B
704 709Right-handed alpha
Helix 78
AI6
B
712 719Right-handed alpha
Helix 79
AI7
B
720 742Right-handed alpha
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There are 3 sheets in PDB entry 6QQ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
47 50anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
47 50anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
75 76anti-parallel
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