Analysis of interatomic Contacts of Structural Units in PDB entry:
6QSI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QSI entry

There are 2 chains in PDB entry 6QSI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ILE 526
B
 LYS 2THR 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6QSI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
25 27Right-handed 310
Helix 3
AA3
A
28 33Right-handed alpha
Helix 4
AA4
A
46 62Right-handed alpha
Helix 5
AA5
A
71 78Right-handed alpha
Helix 6
AA6
A
78 88Right-handed alpha
Helix 7
AA7
A
100 104Right-handed 310
Helix 8
AA8
A
114 118Right-handed 310
Helix 9
AA9
A
131 133Right-handed 310
Helix 10
AB1
A
134 147Right-handed alpha
Helix 11
AB2
A
161 163Right-handed 310
Helix 12
AB3
A
170 174Right-handed 310
Helix 13
AB4
A
186 200Right-handed alpha
Helix 14
AB5
A
208 214Right-handed alpha
Helix 15
AB6
A
216 227Right-handed alpha
Helix 16
AB7
A
256 264Right-handed alpha
Helix 17
AB8
A
301 308Right-handed alpha
Helix 18
AB9
A
317 329Right-handed alpha
Helix 19
AC1
A
354 366Right-handed alpha
Helix 20
AC2
A
379 387Right-handed alpha
Helix 21
AC3
A
405 417Right-handed alpha
Helix 22
AC4
A
428 432Right-handed alpha
Helix 23
AC5
A
433 435Right-handed 310
Helix 24
AC6
A
436 445Right-handed alpha
Helix 25
AC7
A
458 468Right-handed alpha
Helix 26
AC8
A
482 490Right-handed alpha
Helix 27
AC9
A
499 513Right-handed alpha
Helix 28
AD1
B
3 16Right-handed alpha
Helix 29
AD2
B
25 27Right-handed 310
Helix 30
AD3
B
28 33Right-handed alpha
Helix 31
AD4
B
46 62Right-handed alpha
Helix 32
AD5
B
71 78Right-handed alpha
Helix 33
AD6
B
78 88Right-handed alpha
Helix 34
AD7
B
100 104Right-handed 310
Helix 35
AD8
B
114 118Right-handed 310
Helix 36
AD9
B
131 133Right-handed 310
Helix 37
AE1
B
134 147Right-handed alpha
Helix 38
AE2
B
161 163Right-handed 310
Helix 39
AE3
B
170 174Right-handed 310
Helix 40
AE4
B
186 200Right-handed alpha
Helix 41
AE5
B
208 214Right-handed alpha
Helix 42
AE6
B
216 227Right-handed alpha
Helix 43
AE7
B
256 264Right-handed alpha
Helix 44
AE8
B
301 308Right-handed alpha
Helix 45
AE9
B
317 329Right-handed alpha
Helix 46
AF1
B
354 366Right-handed alpha
Helix 47
AF2
B
379 387Right-handed alpha
Helix 48
AF3
B
405 417Right-handed alpha
Helix 49
AF4
B
428 432Right-handed alpha
Helix 50
AF5
B
433 435Right-handed 310
Helix 51
AF6
B
436 445Right-handed alpha
Helix 52
AF7
B
458 469Right-handed alpha
Helix 53
AF8
B
482 490Right-handed alpha
Helix 54
AF9
B
499 513Right-handed alpha
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There are 6 sheets in PDB entry 6QSI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
19 22parallel
Strand 3
A
65 70parallel
Strand 4
A
92 98parallel
Strand 5
A
154 159parallel
Strand 6
A
126 127parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
231 233parallel
Strand 3
A
203 207parallel
Strand 4
A
269 273parallel
Strand 5
A
294 299parallel
Strand 6
A
312 315parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
371 375parallel
Strand 3
A
422 427parallel
Strand 4
A
449 454parallel
Strand 5
A
517 522parallel
Strand 6
A
493 496parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 43first strand
Strand 2
B
19 22parallel
Strand 3
B
65 70parallel
Strand 4
B
92 98parallel
Strand 5
B
154 159parallel
Strand 6
B
126 127parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
231 233parallel
Strand 3
B
203 207parallel
Strand 4
B
269 273parallel
Strand 5
B
294 299parallel
Strand 6
B
312 315parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
395 396first strand
Strand 2
B
371 375parallel
Strand 3
B
422 427parallel
Strand 4
B
449 454parallel
Strand 5
B
517 522parallel
Strand 6
B
493 496parallel
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