Analysis of interatomic Contacts of Structural Units in PDB entry:
6QTA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QTA entry

There are 2 chains in PDB entry 6QTA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4696SER 4997
B
 HIS 28ALA 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6QTA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4702 4733Right-handed alpha
Helix 2
AA2
A
4789 4794Right-handed 310
Helix 3
AA3
A
4799 4819Right-handed alpha
Helix 4
AA4
A
4845 4854Right-handed alpha
Helix 5
AA5
A
4864 4886Right-handed alpha
Helix 6
AA6
A
4907 4923Right-handed alpha
Helix 7
AA7
A
4963 4966Right-handed 310
Helix 8
AA8
A
4976 4978Right-handed 310
Helix 9
AA9
A
4979 4996Right-handed alpha
Helix 10
AB1
B
58 60Right-handed 310
Helix 11
AB2
B
61 73Right-handed alpha
Helix 12
AB3
B
76 80Right-handed 310
Helix 13
AB4
B
102 110Right-handed alpha
Helix 14
AB5
B
114 118Right-handed 310
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There are 2 sheets in PDB entry 6QTA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4832 4836first strand
Strand 2
A
4821 4828anti-parallel
Strand 3
A
4780 4787parallel
Strand 4
A
4894 4901parallel
Strand 5
A
4926 4932parallel
Strand 6
A
4971 4974parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4957 4961first strand
Strand 2
A
4947 4951anti-parallel
Strand 3
B
53 56parallel
Strand 4
B
36 42anti-parallel
Strand 5
B
120 126parallel
Strand 6
B
83 88anti-parallel
Strand 7
B
95 96anti-parallel
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