Analysis of interatomic Contacts of Structural Units in PDB entry:
6QTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QTB entry

There are 4 chains in PDB entry 6QTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4698GLU 4994
B
 VAL 12SER 98
D
 PRO 4699VAL 4995
E
 VAL 12SER 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6QTB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4702 4733Right-handed alpha
Helix 2
AA2
A
4789 4797Right-handed 310
Helix 3
AA3
A
4799 4816Right-handed alpha
Helix 4
AA4
A
4845 4854Right-handed alpha
Helix 5
AA5
A
4864 4884Right-handed alpha
Helix 6
AA6
A
4906 4923Right-handed alpha
Helix 7
AA7
A
4942 4945Right-handed 310
Helix 8
AA8
A
4963 4966Right-handed 310
Helix 9
AA9
A
4976 4978Right-handed 310
Helix 10
AB1
A
4979 4992Right-handed alpha
Helix 11
AB2
B
23 27Right-handed 310
Helix 12
AB3
B
29 32Right-handed 310
Helix 13
AB4
B
42 52Right-handed alpha
Helix 14
AB5
B
75 83Right-handed alpha
Helix 15
AB6
D
4702 4733Right-handed alpha
Helix 16
AB7
D
4789 4797Right-handed 310
Helix 17
AB8
D
4799 4819Right-handed alpha
Helix 18
AB9
D
4845 4854Right-handed alpha
Helix 19
AC1
D
4864 4886Right-handed alpha
Helix 20
AC2
D
4906 4923Right-handed alpha
Helix 21
AC3
D
4934 4938Right-handed 310
Helix 22
AC4
D
4942 4945Right-handed 310
Helix 23
AC5
D
4963 4966Right-handed 310
Helix 24
AC6
D
4976 4978Right-handed 310
Helix 25
AC7
D
4979 4995Right-handed alpha
Helix 26
AC8
E
29 32Right-handed 310
Helix 27
AC9
E
42 52Right-handed alpha
Helix 28
AD1
E
75 83Right-handed alpha
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There are 4 sheets in PDB entry 6QTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4832 4836first strand
Strand 2
A
4821 4828anti-parallel
Strand 3
A
4778 4787parallel
Strand 4
A
4892 4901parallel
Strand 5
A
4925 4932parallel
Strand 6
A
4971 4974parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4957 4961first strand
Strand 2
A
4947 4951anti-parallel
Strand 3
B
34 38parallel
Strand 4
B
14 20anti-parallel
Strand 5
B
91 97parallel
Strand 6
B
63 67anti-parallel
Strand 7
B
70 71anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4832 4836first strand
Strand 2
D
4821 4828anti-parallel
Strand 3
D
4779 4787parallel
Strand 4
D
4893 4901parallel
Strand 5
D
4925 4932parallel
Strand 6
D
4971 4974parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4957 4961first strand
Strand 2
D
4947 4951anti-parallel
Strand 3
E
34 38parallel
Strand 4
E
14 20anti-parallel
Strand 5
E
91 97parallel
Strand 6
E
63 67anti-parallel
Strand 7
E
70 71anti-parallel
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