Analysis of interatomic Contacts of Structural Units in PDB entry:
6QU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QU0 entry

There are 2 chains in PDB entry 6QU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 211
B
 MET 1PHE 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6QU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 34Right-handed alpha
Helix 2
AA2
A
53 55Right-handed 310
Helix 3
AA3
A
66 71Right-handed alpha
Helix 4
AA4
A
73 93Right-handed alpha
Helix 5
AA5
A
108 119Right-handed alpha
Helix 6
AA6
A
155 160Right-handed 310
Helix 7
AA7
A
161 173Right-handed alpha
Helix 8
AA8
A
192 208Right-handed alpha
Helix 9
AA9
B
17 34Right-handed alpha
Helix 10
AB1
B
66 71Right-handed alpha
Helix 11
AB2
B
73 93Right-handed alpha
Helix 12
AB3
B
108 119Right-handed alpha
Helix 13
AB4
B
156 160Right-handed 310
Helix 14
AB5
B
161 173Right-handed alpha
Helix 15
AB6
B
189 191Right-handed 310
Helix 16
AB7
B
192 209Right-handed alpha
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There are 6 sheets in PDB entry 6QU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
3 8parallel
Strand 3
A
95 101parallel
Strand 4
A
140 147parallel
Strand 5
A
177 184parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
62 63anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
131 134anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 43first strand
Strand 2
B
3 8parallel
Strand 3
B
95 101parallel
Strand 4
B
140 147parallel
Strand 5
B
177 184parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
62 63anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 128first strand
Strand 2
B
131 134anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il